Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_09696
• Subject: XM_006517403.3
• Aligned Length: 1461
• Identities: 830
• Gaps: 546

Alignment

Query    1  ATGGGTGTGATAGGTATACAGCTGGTTGTTACCATGGTGATGGCCAGTGTCATGCAGAAGATTATACCTCACTA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTCTCTTGCTCGATGGCTACTCTGTAATGGCAGTTTGAGGTGGTATCAACATCCTACAGAAGAAGAATTAAGAA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTCTTGCAGGGAAACAACAAAAAGGGAAAACCAAAAAAGATAGGAAATATAATGGTCACATTGAAAGTAAGCCA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTAACCATTCCAAAGGATATTGACCTTCATCTAGAAACAAAGTCAGTTACAGAAGTGGATACTTTAGCATTGCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TTACTTTCCAGAATACCAGTGGCTGGTGGATTTCACAGTGGCTGCTACAGTTGTGTATCTAGTAACTGAAGTCT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACTACAATTTTATGAAGCCTACACAGGAAATGAATATCAGCTTAGTCTGGTGCCTACTTGTTTTGTCTTTTGCA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ATCAAAGTTCTATTTTCATTAACTACACACTATTTTAAAGTAGAAGATGGTGGTGAAAGATCTGTTTGTGTCAC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CTTTGGATTTTTTTTCTTTGTCAAAGCAATGGCAGTGTTGATTGTAACAGAAAATTATCTGGAATTTGGACTTG  592
                                        ||||||||.|||||.||||||||.||.||.|||||.|||||.||||
Sbjct    1  ----------------------------ATGGCAGTTTTGATCGTAACAGAGAACTACCTGGAGTTTGGCCTTG  46

Query  593  AAACAGGGTTTACAAATTTTTCAGACAGTGCGATGCAGTTTCTTGAAAAGCAAGGTTTAGAATCTCAGAGTCCT  666
            |||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||.|.|||
Sbjct   47  AAACAGGGTTTACAAATTTTTCAGACAGTGCAATGCAGTTTCTTGAAAAGCAGGGTTTAGAATCTCAGGGCCCT  120

Query  667  GTTTCAAAACTTACTTTCAAATTTTTCCTGGCTATTTTCTGTTCATTCATTGGGGCTTTTTTGACATTTCCTGG  740
            |||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||
Sbjct  121  GTTTCAAAACTTACTTTCAAATTTTTCCTGGCTGTTTTCTGTTCACTCATTGGGGCTTTTTTGACATTTCCTGG  194

Query  741  ATTACGACTGGCTCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTACACAAACTTTACTTCATA  814
            ||||||.||||||||||||||||||||||||||||||.|||||||||||||||||||||||||.||||||||||
Sbjct  195  ATTACGGCTGGCTCAAATGCATCTGGATGCCCTGAATATGGCAACAGAAAAAATTACACAAACATTACTTCATA  268

Query  815  TCAACTTCTTGGCACCTTTATTTATGGTTTTGCTCTGGGTAAAACCAATCACCAAAGACTACATTATGAACCCA  888
            |||||||||||||||||||||||||||||.||||||||||.||||||||||||||||||||.||.|||||||||
Sbjct  269  TCAACTTCTTGGCACCTTTATTTATGGTTCTGCTCTGGGTGAAACCAATCACCAAAGACTATATCATGAACCCA  342

Query  889  CCACTGGGCAAAGAAAGTATCCCTTTAATGACAGAAGCCACATTCGATACTCTGCGACTCTGGTTAATAATCCT  962
            ||..||||.|.|||.|||.|||||.|||||||||||||||||||.||||||||.||||||||||||||||||||
Sbjct  343  CCGTTGGGTAGAGAGAGTGTCCCTCTAATGACAGAAGCCACATTTGATACTCTTCGACTCTGGTTAATAATCCT  416

Query  963  GCTGTGTGCTTTGCGGTTGGCCATGATGCGTAGTCACCTGCAAGCTTATTTAAATTTAGCCCAAAAATGTGTGG  1036
            |||.||||.|||||||||||||||||||||.||||||||||||||.|||||||||||.|||||.||||||||||
Sbjct  417  GCTCTGTGTTTTGCGGTTGGCCATGATGCGAAGTCACCTGCAAGCATATTTAAATTTGGCCCAGAAATGTGTGG  490

Query 1037  ATCAGATGAAGAAAGAAGCGGGGCGAATAAGCACGGTTGAGCTACAGAAAATGGTGGCTCGAGTCTTTTATTAT  1110
            ||||.||||||||||||||.||.||||||||.||.|||||||||||||||||||||||.|||||||||||.||.
Sbjct  491  ATCAAATGAAGAAAGAAGCTGGCCGAATAAGTACAGTTGAGCTACAGAAAATGGTGGCGCGAGTCTTTTACTAC  564

Query 1111  CTTTGTGTCATTGCACTGCAGTATGTGGCGCCTCTGGTAATGCTGCTTCACACAACTCTGCTTTTGAAAACACT  1184
            ||.|||||||||||.||||||||||||||.||||||||||||||||||||.|..|||||||||.||||||||||
Sbjct  565  CTGTGTGTCATTGCCCTGCAGTATGTGGCACCTCTGGTAATGCTGCTTCATATGACTCTGCTTCTGAAAACACT  638

Query 1185  AGGTAATCATTCCTGGGGTATTTATCCAGAATCTATCTCTACCTTACCAGTGGATAATAGTCTACTGTCCAATT  1258
            ||||||||||||||||||.||||||||||||.|...||.|.||||.|||||||||||||.|||.|...||||.|
Sbjct  639  AGGTAATCATTCCTGGGGAATTTATCCAGAAGCCGCCTTTCCCTTGCCAGTGGATAATAATCTCCCCGCCAACT  712

Query 1259  CTGTTTACTCTGAATTACCATCAGCTGAAGGGAAAATGAAGGTAACTGTTACACAAATAACAGTGGCACTGAGC  1332
            |.|.||||.|||||.||||||||.||||.|||||.|||||||||||||||||||||||.||||||||.||||||
Sbjct  713  CGGCTTACCCTGAACTACCATCACCTGATGGGAAGATGAAGGTAACTGTTACACAAATCACAGTGGCCCTGAGC  786

Query 1333  AGCTTAAAAAATATTTTTACTCCTCTTCTTTTTCGAGGACTTCTGTCTTTTCTGACCTGGTGGATTGCTGCTTG  1406
            |||||||||||.||.||.||.|||||.||||||||||||||||||||.|||.||||.|||||||||||.|||||
Sbjct  787  AGCTTAAAAAACATCTTCACGCCTCTCCTTTTTCGAGGACTTCTGTCATTTTTGACATGGTGGATTGCAGCTTG  860

Query 1407  CCTCTTTTCTACAAGCCTTTTTGGGCTTTTCTATCACCAGTATCTGACTGTGGCA  1461
            ||||||||||||||||||||||||||||||||||||.||||||.||||.||||||
Sbjct  861  CCTCTTTTCTACAAGCCTTTTTGGGCTTTTCTATCATCAGTATTTGACAGTGGCA  915