Construct: ORF ccsbBroadEn_09696

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007658.1_s300c1, BRDN0000396557
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM161B (153396)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 153396 TMEM161B transmembrane protein 161B NM_153354.4 99.9% 100% 844C>T
2 human 153396 TMEM161B transmembrane protein 161B NM_001289008.1 97.6% 97.7% 0_1ins33;811C>T
3 human 153396 TMEM161B transmembrane protein 161B XM_024454375.1 97.6% 97.7% 0_1ins33;811C>T
4 human 153396 TMEM161B transmembrane protein 161B NM_001289007.2 88.8% 87.2% (many diffs)
5 human 153396 TMEM161B transmembrane protein 161B NM_001349407.1 83.4% 82% (many diffs)
6 human 153396 TMEM161B transmembrane protein 161B XM_017009094.2 83.3% 81.7% (many diffs)
7 human 153396 TMEM161B transmembrane protein 161B XM_006714553.1 81.8% 75.6% 844C>T;1088_1089ins97;1197_1198ins167
8 human 153396 TMEM161B transmembrane protein 161B XM_024454378.1 79.6% 73.4% (many diffs)
9 human 153396 TMEM161B transmembrane protein 161B XM_024454373.1 79.5% 77.9% (many diffs)
10 human 153396 TMEM161B transmembrane protein 161B XM_017009100.2 77.5% 71.5% (many diffs)
11 human 153396 TMEM161B transmembrane protein 161B XM_024454376.1 77.5% 71.5% (many diffs)
12 human 153396 TMEM161B transmembrane protein 161B XM_017009093.2 75.6% 72.4% (many diffs)
13 human 153396 TMEM161B transmembrane protein 161B XM_024454372.1 73.8% 70.6% (many diffs)
14 human 153396 TMEM161B transmembrane protein 161B XM_024454374.1 73.8% 70.6% (many diffs)
15 human 153396 TMEM161B transmembrane protein 161B XM_024454371.1 72.4% 69.2% (many diffs)
16 human 153396 TMEM161B transmembrane protein 161B NM_001349400.1 62.5% 62.6% 0_1ins546;298C>T
17 human 153396 TMEM161B transmembrane protein 161B NM_001349402.1 62.5% 62.6% 0_1ins546;298C>T
18 human 153396 TMEM161B transmembrane protein 161B NM_001349403.1 62.5% 62.6% 0_1ins546;298C>T
19 human 153396 TMEM161B transmembrane protein 161B NM_001349405.1 62.5% 62.6% 0_1ins546;298C>T
20 human 153396 TMEM161B transmembrane protein 161B XM_017009097.2 55% 51.7% (many diffs)
21 human 153396 TMEM161B transmembrane protein 161B NR_110266.1 53.4% (many diffs)
22 human 153396 TMEM161B transmembrane protein 161B XM_011543204.3 46.1% 42.7% (many diffs)
23 human 153396 TMEM161B transmembrane protein 161B XM_017009102.2 46.1% 42.7% (many diffs)
24 human 153396 TMEM161B transmembrane protein 161B XM_024454377.1 46.1% 42.7% (many diffs)
25 human 153396 TMEM161B transmembrane protein 161B XR_001742013.2 37.9% (many diffs)
26 human 153396 TMEM161B transmembrane protein 161B XR_001742014.2 35.3% (many diffs)
27 human 153396 TMEM161B transmembrane protein 161B XR_002959844.1 32.7% (many diffs)
28 human 153396 TMEM161B transmembrane protein 161B XM_017009104.2 30.4% 26.9% (many diffs)
29 mouse 72745 Tmem161b transmembrane protein 161B NM_175187.5 91.2% 95% (many diffs)
30 mouse 72745 Tmem161b transmembrane protein 161B XM_006517402.1 85.5% 84.6% (many diffs)
31 mouse 72745 Tmem161b transmembrane protein 161B XM_006517403.3 56.8% 58.7% (many diffs)
32 mouse 72745 Tmem161b transmembrane protein 161B XM_006517404.3 56.8% 58.7% (many diffs)
33 mouse 72745 Tmem161b transmembrane protein 161B XM_006517405.3 56.8% 58.7% (many diffs)
34 mouse 72745 Tmem161b transmembrane protein 161B XM_011244565.2 56.8% 58.7% (many diffs)
35 mouse 72745 Tmem161b transmembrane protein 161B NR_029419.1 48.2% (many diffs)
36 mouse 72745 Tmem161b transmembrane protein 161B NR_029418.1 47.9% (many diffs)
37 mouse 72745 Tmem161b transmembrane protein 161B XR_001780819.1 46.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1527
ORF length:
1461
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG TGTGATAGGT ATACAGCTGG TTGTTACCAT GGTGATGGCC AGTGTCATGC
121AGAAGATTAT ACCTCACTAT TCTCTTGCTC GATGGCTACT CTGTAATGGC AGTTTGAGGT
181GGTATCAACA TCCTACAGAA GAAGAATTAA GAATTCTTGC AGGGAAACAA CAAAAAGGGA
241AAACCAAAAA AGATAGGAAA TATAATGGTC ACATTGAAAG TAAGCCATTA ACCATTCCAA
301AGGATATTGA CCTTCATCTA GAAACAAAGT CAGTTACAGA AGTGGATACT TTAGCATTGC
361ATTACTTTCC AGAATACCAG TGGCTGGTGG ATTTCACAGT GGCTGCTACA GTTGTGTATC
421TAGTAACTGA AGTCTACTAC AATTTTATGA AGCCTACACA GGAAATGAAT ATCAGCTTAG
481TCTGGTGCCT ACTTGTTTTG TCTTTTGCAA TCAAAGTTCT ATTTTCATTA ACTACACACT
541ATTTTAAAGT AGAAGATGGT GGTGAAAGAT CTGTTTGTGT CACCTTTGGA TTTTTTTTCT
601TTGTCAAAGC AATGGCAGTG TTGATTGTAA CAGAAAATTA TCTGGAATTT GGACTTGAAA
661CAGGGTTTAC AAATTTTTCA GACAGTGCGA TGCAGTTTCT TGAAAAGCAA GGTTTAGAAT
721CTCAGAGTCC TGTTTCAAAA CTTACTTTCA AATTTTTCCT GGCTATTTTC TGTTCATTCA
781TTGGGGCTTT TTTGACATTT CCTGGATTAC GACTGGCTCA AATGCATCTG GATGCCCTGA
841ATTTGGCAAC AGAAAAAATT ACACAAACTT TACTTCATAT CAACTTCTTG GCACCTTTAT
901TTATGGTTTT GCTCTGGGTA AAACCAATCA CCAAAGACTA CATTATGAAC CCACCACTGG
961GCAAAGAAAG TATCCCTTTA ATGACAGAAG CCACATTCGA TACTCTGCGA CTCTGGTTAA
1021TAATCCTGCT GTGTGCTTTG CGGTTGGCCA TGATGCGTAG TCACCTGCAA GCTTATTTAA
1081ATTTAGCCCA AAAATGTGTG GATCAGATGA AGAAAGAAGC GGGGCGAATA AGCACGGTTG
1141AGCTACAGAA AATGGTGGCT CGAGTCTTTT ATTATCTTTG TGTCATTGCA CTGCAGTATG
1201TGGCGCCTCT GGTAATGCTG CTTCACACAA CTCTGCTTTT GAAAACACTA GGTAATCATT
1261CCTGGGGTAT TTATCCAGAA TCTATCTCTA CCTTACCAGT GGATAATAGT CTACTGTCCA
1321ATTCTGTTTA CTCTGAATTA CCATCAGCTG AAGGGAAAAT GAAGGTAACT GTTACACAAA
1381TAACAGTGGC ACTGAGCAGC TTAAAAAATA TTTTTACTCC TCTTCTTTTT CGAGGACTTC
1441TGTCTTTTCT GACCTGGTGG ATTGCTGCTT GCCTCTTTTC TACAAGCCTT TTTGGGCTTT
1501TCTATCACCA GTATCTGACT GTGGCATGCC CAACTTTCTT GTACAAAGTt ggcattataa
1561gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)