Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_09811
• Subject: NM_016078.6
• Aligned Length: 847
• Identities: 560
• Gaps: 251

Alignment

Query   1  ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAG  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAG  74

Query  75  ACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCG  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  ACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCG  148

Query 149  TCTGTCTTCTCTGTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTTACAATTATCTTGTTGTTGTCGTGT  222
           |||.|||||||||||.|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 149  TCTATCTTCTCTGTGGGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTGACAATTATCTTGTTGTTGTCGTGT  222

Query 223  GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA  296

Query 297  TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT  370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297  TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT  370

Query 371  CAAGAATCTTTTGGTTGGGACTTATTGCCTGTTCAGTACTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCC  444
           ||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||||||||||||||||||
Sbjct 371  CAAGAATCTTTTGGTTGGGACTTATTGCCTGTCCAGTACTGTGGGTGATATTTGCTTTTAGTGCACTCTTCTCC  444

Query 445  TTCACAGTAAAGTGGCTGAGACGGTCTCGCCACATTGCCCAGACTGGTCTGAAAGTCTTGGGCTCAAGAGATCC  518
           ||||.||||||||||.|  |.||||                                                 
Sbjct 445  TTCAGAGTAAAGTGGTT--GGCGGT-------------------------------------------------  467

Query 519  TCCCGCTTCCGCCTTCCAAAGCGCTGGGATAACAGGCGTGAGCCGCTGCCCGG-GCCATCCCTCGAGTA-AGTT  590
                                     ||.||.||.|.|||.|..|||.|..|| ||||.||    .||| .|||
Sbjct 468  --------------------------GGTTATCATGGGTGTGGTGCTACAAGGTGCCAACC----TGTATGGTT  511

Query 591  TCATCAGGTAGACATTAATTCTTTCACGAGGATCACGGATCGAGCTCTTTACTGGAAACCTGCGCCCCGCCTTA  664
           .||||||||                                             |.||..|||||        |
Sbjct 512  ACATCAGGT---------------------------------------------GTAAGGTGCGC--------A  532

Query 665  GTTCTCCACCTCTTCGTGCGGCTCCAG---GCAACTGCCAA-CAG-ATGGCGCCCGCCCGCCTATTTC-TCTCC  732
           |                       |||   |||..|   || ||| ||||           |||.||| |.|  
Sbjct 533  G-----------------------CAGAAAGCATTT---AACCAGCATGG-----------CTACTTCATAT--  567

Query 733  TTGCGGCTTTGGGCCTGGAGGGGAGGTGGGGAGAGTCCCAATAGCAG-----AGGA------ACTGGTGAGCCC  795
                  |||||                            |.|||||     |.||      |||||.||    
Sbjct 568  -------TTTGG----------------------------AAAGCAGTTTTTAAGACAAAACACTGGAGA----  602

Query 796  GGGCCAAAATTTCATCTGGCATCCGGAATGCAT  828
                      |.|||.|.|.|||         
Sbjct 603  -----------TGATCAGACTTCC---------  615