Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10627
- Subject:
- XM_005255683.4
- Aligned Length:
- 1665
- Identities:
- 703
- Gaps:
- 930
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTGGCTATCTTGCCTCCTGGTTGCTTGACTCCAGGATCACAGAACAATGACAAAAGACAATTTCTGCTGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGACTGCTGGATGCAGTGAAACAGTGCCAGATCCGCTTTGGAGGGAGAAAGGAGATTGCCTCGGATTCCGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGGGTCACCTGTCTGTGTGCCCAGTTTGAAGCCGTCCTGCAGCATGGCTTGAAGAGGAGTCGAGGATTGGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCACAGCGGCAGCGATCAAGCAGGCAGCGGGCTTTGCCAGCAAAACCGAAACAGAGCCCGTGTTCTGGTACTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGTGAAGGAGGTCCTCAACAAGCACGAGCTGCAGCGCTTCTACTCCCTGCGCCACATCGCCTCAGACGTGGGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGGTCGCGCCTGGCTGCGCTGTGCCCTCAACGAACACTCCCTGGAGCGCTACCTGCACATGCTCCTGGCCGAC 444
Query 1 ------------------------------------------ATGGATGAAGAGAGGTCCAGTATGCTTCCTAC 32
|||||||||||.||||||||||||||||||||
Sbjct 445 CGCTGCAGGCTGAGCACTTTTTATGAAGACTGGTCTTTTGTGATGGATGAAGAAAGGTCCAGTATGCTTCCTAC 518
Query 33 CATGGCAGCAGGTCCGAACTCCATACTCTTTGCGATTAACATTGACAACAAGGATTTGAACGGGCAGAGTAAGT 106
||||||||||||||.|||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 519 CATGGCAGCAGGTCTGAACTCCATACTCTTTGCGATTAACATCGACAACAAGGATTTGAACGGGCAGAGTAAGT 592
Query 107 TTGCTCCCACCGTTTCAGACCTCTTAAAGGAGTCAACGCAGAATGTGA---CCTTGCTGAAGGAGTCCACGCAA 177
|||||||||||||||||||||||||||||||||||||||||||.|||| |||||||||||||||||||||||
Sbjct 593 TTGCTCCCACCGTTTCAGACCTCTTAAAGGAGTCAACGCAGAACGTGACCTCCTTGCTGAAGGAGTCCACGCAA 666
Query 178 GGAGTGAGCAGCGTGTTCAGGGAGATCACAGCCTCCTCTGCCATCTCCATCCTCATCAAACCTGAACAGGAGAC 251
||||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 667 GGAGTGAGCAGCCTGTTCAGGGAGATCACAGCCTCCTCTGCCGTCTCCATCCTCATCAAACCTGAACAGGAGAC 740
Query 252 CGACCCCTTGCCCGTCGTGTCCAGGAATGTCAGTGCTGATGCCAAATGCAAAAAGGAGCGGAAGAAGAAAAAGC 325
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 741 CGACCCCTTGCCTGTCGTGTCCAGGAATGTCAGTGCTGATGCCAAATGCAAAAAGGAGCGGAAGAAGAAAAAGA 814
Query 326 AAGTGACCAACATTATCTCATTTGATGATGAGGAAGATGAGCAGAACTCTGGGGACATGTTTAAAAAGACACCT 399
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 815 AAGTGACCAACATAATCTCATTTGATGATGAGGAAGATGAGCAGAACTCTGGGGACGTGTTTAAAAAGACACCT 888
Query 400 GGGGCAGGGGAGAGCTCAGAGGACAACTCCGACCACTCCTCTGTCAATATCATGTCCGCCTTTGAAAGCCCCTT 473
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGGGCAGGGGAGAGCTCAGAGGACAACTCCGACCGCTCCTCTGTCAATATCATGTCCGCCTTTGAAAGCCCCTT 962
Query 474 CGGGCCAAACTCCAATGGAAGTCAGAGCAGCAACTCGTGGAAAATTGATTCCCTGTCTTTGAACAGGGAGTTTG 547
||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||||||.|||||||||
Sbjct 963 CGGGCCTAACTCCAATGGAAGTCAGAGCAGCAACTCATGGAAAATTGATTCCCTGTCTTTGAACGGGGAGTTTG 1036
Query 548 GGTACCAGAAGCTTGATGTGAAAAGCATCGATGATGAAGATGTGGATGAAAACGAAGATGACGTGTATGGAAAC 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGTACCAGAAGCTTGATGTGAAAAGCATCGATGATGAAGATGTGGATGAAAACGAAGATGACGTGTATGGAAAC 1110
Query 622 TCATCAGGACGGAAGCACAGGGGCCACTCAGAGTCGCCCGAGAA-------AAACGGAGCACACTCTG--TCAC 686
|||||||||.|||||||||||||||||||.|||||||||||||| .||.|||.||| ||| ||.|
Sbjct 1111 TCATCAGGAAGGAAGCACAGGGGCCACTCGGAGTCGCCCGAGAAGCCACTGGAAGGGAACAC---CTGCCTCTC 1181
Query 687 CCAG-------GCTGGAGTGCAATG--------GCACGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCA 745
|||| |||||..|.|..|| ||||.|| |.||| |..||.||||| ||||.| |||
Sbjct 1182 CCAGATGCACAGCTGGGCTCCGCTGAAGGTGCTGCACAAT---GACTC-CGACATCCTCT---TCCCTG--TCA 1246
Query 746 GG------------------------------------------------------------------------ 747
|.
Sbjct 1247 GTGGCGTGGGCTCCTACAGCCCAGCAGATGCCCCCCTCGGAAGCCTGGAGAACGGGACAGGACCAGAGGACCAC 1320
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1321 GTTCTCCCAGATCCTGGACTTCGGTACAGTGTGGAAGCCAGCTCTCCAGGCCACGGAAGTCCTCTGAGCAGCCT 1394
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1395 GTTACCTTCTGCCTCAGTGCCAGAGTCCATGACAATTAGTGAACTGCGCCAGGCCACTGTGGCCATGATGAACA 1468
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1469 GGAAGGATGAGCTGGAGGAGGAGAACAGATCACTGCGAAACCTGCTCGACGGTGAGATGGAGCACTCAGCCGCG 1542
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1543 CTCCGGCAAGAGGTGGACACCTTGAAAAGGAAGGTGGCTGAACAGGAGGAGCGGCAGGGCATGAAGGTCCAGGC 1616
Query 748 ------------------------------------- 747
Sbjct 1617 GCTGGCCAGCTATCTTTGCTATTTTGTGAGGAGATTC 1653
