Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_10806
• Subject: NM_001005915.1
• Aligned Length: 999
• Identities: 523
• Gaps: 456

Alignment

Query   1  ATGAGGGCGAACGACGCTCTGCAGGTGCTGGGCTTGCTTTTCAGCCTGGCCCGGGGCTCCGAGGTGGGCAACTC  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGAGGGCGAACGACGCTCTGCAGGTGCTGGGCTTGCTTTTCAGCCTGGCCCGGGGCTCCGAGGTGGGCAACTC  74

Query  75  TCAGGCAGTGTGTCCTGGGACTCTGAATGGCCTGAGTGTGACCGGCGATGCTGAGAACCAATACCAGACACTGT  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  TCAGGCAGTGTGTCCTGGGACTCTGAATGGCCTGAGTGTGACCGGCGATGCTGAGAACCAATACCAGACACTGT  148

Query 149  ACAAGCTCTACGAGAGGTGTGAGGTGGTGATGGGGAACCTTGAGATTGTGCTCACGGGACACAATGCCGACCTC  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  ACAAGCTCTACGAGAGGTGTGAGGTGGTGATGGGGAACCTTGAGATTGTGCTCACGGGACACAATGCCGACCTC  222

Query 223  TCCTTCCTGCAGTGGATTCGAGAAGTGACAGGCTATGTCCTCGTGGCCATGAATGAATTCTCTACTCTACCATT  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  TCCTTCCTGCAGTGGATTCGAGAAGTGACAGGCTATGTCCTCGTGGCCATGAATGAATTCTCTACTCTACCATT  296

Query 297  GCCCAACCTCCGCGTGGTGCGAGGGACCCAGGTCTACGATGGGAAGTTTGCCATCTTCGTCATGTTGAACTATA  370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297  GCCCAACCTCCGCGTGGTGCGAGGGACCCAGGTCTACGATGGGAAGTTTGCCATCTTCGTCATGTTGAACTATA  370

Query 371  ACACCAACTCCAGCCACGCTCTGCGCCAGCTCCGCTTGACTCAGCTCACCGAGATTCTGTCAGGGGGTGTTTAT  444
           |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||           
Sbjct 371  ACACCAACTCCAGCCACGCTCTGCGCCAGCTCCGCTTGACTCAGCTCACCG-------GTCAG-----------  426

Query 445  ATTGAGAAGAACGATAAGCTTTGTCAC-ATGGACACAATTGACTGGAGGGACATCGTGAGGGACCGAGATGCTG  517
                                 .||.| ||||      ||          .|.||                   
Sbjct 427  ----------------------TTCCCGATGG------TT----------CCTTC-------------------  443

Query 518  AGATAGTGGTGAAGGACAATGGCAGAAGCTGTCCCCCCTGTCATGAGGTTTGCAAGGGGCGATGCTGGGGTCCT  591
                              ||||       .||.|||||                                   
Sbjct 444  -------------------TGGC-------CTCACCCCT-----------------------------------  456

Query 592  GGATCAGAAGACTGCCAGACATTGACCAAGACCATCTGTGCTCCTCAGTGTAATGGTCACTGCTTTGGGCCCAA  665
                      |.||||      |.|||||||                     ||||..||.|||         
Sbjct 457  -----------CAGCCA------GCCCAAGAC---------------------TGGTACCTCCTT---------  483

Query 666  CCCCAACCAGTGCTGCCATGATGAGTGTGCCGGGGGCTGCTCAGGCCCTCAGGACACAGACTGCTTTGCCTGCC  739
                           .|||||||     ||...|.|||||||  |.||.||              |||||   
Sbjct 484  ----------------GATGATGA-----CCCAAGACTGCTCA--CTCTAAG--------------TGCCT---  517

Query 740  GGCACTT-CAATGACAGTGGAGCCTGTGTACCT----CGCTGTCCACAGCCTCTTGTCTACAACAAGCTAACTT  808
               ||| |||       ||.|||||| .||||    |||||||                              
Sbjct 518  ----CTTCCAA-------GGTGCCTGT-CACCTTGGCCGCTGTC------------------------------  549

Query 809  TCCAGCTGGAACCCAATCCCCACACCAAGTATCAGTATGGAGGAGTTTGTGTAGCCAGCTGTCCCCATAACTTT  882
                                                                                     
Sbjct 550  --------------------------------------------------------------------------  549

Query 883  GTGGTGGATCAAACATCCTGTGTCAGGGCCTGTCCTCCTGACAAGATGGAAGTAGATAAAAATGGGCTCAAGAT  956
                                                                                     
Sbjct 550  --------------------------------------------------------------------------  549

Query 957  GTGTGAGCCTTGTGGGGGACTATGTCCCAAAGCCTTT  993
                                                
Sbjct 550  -------------------------------------  549