Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10887
- Subject:
- XR_377483.3
- Aligned Length:
- 2299
- Identities:
- 705
- Gaps:
- 1552
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCCTTCTGGGAGGGACCGAGTGAGAACCCCTTTGGGACGTGTAGAAATATTTGTGTGGTTCGAGAATATTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGGACGGGCTTGGCAAAGGCGTAGCTGCAGAGAGCACGCTTGGGTGGAGAGGGCCGCACGCCCCAGCGCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTAAGCCCCTCCCGACGGCGTTATTTCAAACTGCGCGACCGTTTCTCCGCTCCCTACGCGGAGGTGGGGGCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACCTAGTTCCGGACGTAGTAACACGCCGAGCGCGAGCCTTCCGCAATTCACGGAACACAGTTGCGCAAGTGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTAAAGCAGTCCCGCTGTACCTAAAGGGGGAGTGTCACGTACTTGGCGTAAGGAGAGTGTAGGCCCTTCCCGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTGGCGGCGGTTAGGGCGTTTACGTAACGGCGTGACGTAAGCGGAGACGCGTTAGTGGGGGGAAGGTTCTAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAGCGGCGGTCTCGGCTCCAGCGGCAGTAGCAGCGGCGCCGGTCCCGTGTGCAGGAGCTCCTTTGCGGCCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTCTTGGCCATCGCCTGCTCTCCCCACAGCGCCAGGACGAGTCCCGTGCGCGTCCGTCCGCGGAGGTCTTTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATCTCGCTCGGCTGCGGGAAATCGGGCTGAAGCGACTGAGTCCGCGATGGAGAAAACTTTAGAAACTGTTCCT 666
Query 1 ATGG---------AGAGAGAAAAGGAACAGTTCCGTAAGCTCTTTATTGGTGGCTTAAGCTTTGAAACCACAGA 65
.||| ||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTGGAGAGGAAAAAGAGAGAAAAGGAACAGTTCCGAAAGCTCTTTATTGGTGGCTTAAGCTTTGAAACCACAGA 740
Query 66 AGAAAGTTTGAGGAACTACTACGAACAATGGGGAAAGCTTACAGACTGTGTGGTAATGAGGGATCCTGCAAGCA 139
||||||||||||.||||||||.||.||||||||||||||.||||||||||||||.|||.|||||||||||||||
Sbjct 741 AGAAAGTTTGAGAAACTACTATGAGCAATGGGGAAAGCTCACAGACTGTGTGGTTATGCGGGATCCTGCAAGCA 814
Query 140 AAAGATCAAGAGGATTTGGTTTTGTAACTTTTTCATCCATGGCTGAGGTTGATGCTGCCATGGCTGCAAGACCT 213
|||||||||||||||||||.|||||||||||.|||||||||||.||||||||.|||||||||||||||||.||.
Sbjct 815 AAAGATCAAGAGGATTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTTGACGCTGCCATGGCTGCAAGGCCC 888
Query 214 CATTCAATTGATGGGAGAGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGGAATCTGGAAAACCAGGGGCTCA 287
|||||.||||||||.||.|||||||||||||||||||||||||||||||||||.||||||||||||||.||.||
Sbjct 889 CATTCCATTGATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTGGAAAACCAGGAGCCCA 962
Query 288 TGTAACTGTGAAGAAGCTGTTTGTTGGCGGAATTAAAGAAGATACTGAGGAACATCACCTTAGAGATTACTTTG 361
|||.|||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||||||||||||||||
Sbjct 963 TGTGACTGTGAAGAAGCTGTTTGTTGGTGGAATTAAGGAAGATACTGAGGAACACCACCTTAGAGATTACTTTG 1036
Query 362 AGGAATATGGAAAAATTGATACCATTGAGATAATTACTGATAGGCAGTCTGGAAAGAAAAGAGGCTTTGGCTTT 435
|.||.|||||||||||||||||.|||||.||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGAGTATGGAAAAATTGATACTATTGAAATAATTACCGATAGGCAGTCTGGAAAGAAAAGAGGCTTTGGCTTT 1110
Query 436 GTTACTTTTGATGACCATGATCCTGTGGATAAAATCGTATTGCAGAAATACCATACCATCAATGGTCATAATGC 509
|||||||||||||||||||||||||||||||||||.||.|||||.|||||.||.|||||.||||||||.|||||
Sbjct 1111 GTTACTTTTGATGACCATGATCCTGTGGATAAAATTGTCTTGCAAAAATATCACACCATAAATGGTCACAATGC 1184
Query 510 AGAAGTAAGAAAGGCTTTGTCTAGACAAGAAATGC--------------------------------------- 544
||||||.||||||||.|||||||||||||||||||
Sbjct 1185 AGAAGTTAGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGTGGAAGAGGAGGAAACT 1258
Query 545 -------------------------------------------------------------------------- 544
Sbjct 1259 TTGGTTTTGGGGATTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGACCAGGAAGCAACTTTAGGGGGGGATCT 1332
Query 545 --------------------------------------------------AGGAGGACCTGGAGGTGGCAATTT 568
||||||||||||||||||||||||
Sbjct 1333 GATGGATACGGAAGTGGACGTGGATTTGGGGATGGCTATAATGGGTATGGAGGAGGACCTGGAGGTGGCAATTT 1406
Query 569 TGGAGGTAGCCCCGGTTATGGAGGAGGAAGAGGAGGATATGGTGGTGGAGGACCTGGATATGGCAACCAGGGTG 642
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGGAGGTAGCCCTGGTTATGGAGGAGGAAGAGGAGGATATGGTGGTGGAGGACCTGGATATGGCAACCAGGGTG 1480
Query 643 GGGGCTACGGAGGTGGTTATGACAACTATGGAGGAGGAAATTATGGAAGTGGAAATTACAATGATTTTGGAAAT 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1481 GGGGCTACGGAGGTGGTTATGACAACTATGGAGGAGGAAATTATGGAAGTGGAAGTTACAATGATTTTGGAAAT 1554
Query 717 TATAACCAGCAACCTTCTAACTACGGTCCAA------------------------------------------- 747
|||||||||||.|||||||||||.|||||||
Sbjct 1555 TATAACCAGCAGCCTTCTAACTATGGTCCAATGAAGAGTGGAAACTTTGGGGGTAGCAGGAACATGGGAGGACC 1628
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1629 ATATGGTGGAGGGAACTATGGTCCTGGAGGAAGTGGAGGAAGTGGTGGCTATGGTGGAAGGAGCAGATATTAAG 1702
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1703 CTTCTTCCTACTTACCATGGCATTGATATGAACCATGGACAAGTATATTCTGCTGCCACAAAGACTGTAAAGTG 1776
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1777 CTTCATTTCAACAGCTGAGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGTGGTCAACCACAGAGTCTTCA 1850
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1851 AGAAATAAGAAATTCTGTACCATCTGAAAGTAGTTCTTGTTGGTGCCTTCATTTAAGAAGCACTTTTAAGAAAA 1924
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1925 GGGAATGTTTTCTGATTTAAAACTTCATTTAGTACAGGTTCTTAATAAAATTACAAAAATGCTGATTGTAAAGG 1998
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1999 GTAACATCAAATTAGCAAAGGATAATGTATTGTTTTAGGATTTGTGAGTAGACAGATAAGAGCTCTATTTTAAA 2072
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2073 TACAAGTTTTATAAAATAAATACTTTTGTATCCAAATTACTTGGTGTAATGCTTACACATAAGTGTGAATCTTG 2146
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2147 TTCTATCAACATCAGTTGTCTACAAGATCGACACTATAAATGCTAGACTAGTTTTGCACAGAACTATACATTTA 2220
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2221 GTTCTCATTCAATACTAATAGGAGAAAAAAGCATTAATAGGCATTATTTACTGTCTAATAAAATATACCTTACT 2294
Query 748 ----- 747
Sbjct 2295 ATGAA 2299
