Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_10960
• Subject: NM_001276275.2
• Aligned Length: 1434
• Identities: 695
• Gaps: 714

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATCCCAGCAACTGGAGCAGCTTCATCTTCCAGGGTCACGCCCAGAACCCCCTGCAGGTCGGGGCTGAGCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCAGTCCCGCTTCTTTGCCTCCCAGGGCTGCGCCCAGAGTCCATTCCAGGCCGCGCCGGCGCCCCCGCCCACGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCAGGCCCCGGCGGCCGAGCCCCTCCAGGTGGACTTGCTCCCGGTGCTCGCCGCCGCCCAGGAGTCCGCCGCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTGCTGCGGCCGCTGCCGCCGCTGCTGCCGCCGTCGCTGCCGCGCCCCCGGCCCCTGCCGCCGCCTCTACGGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGACACAGCGGCCCTGAAGCAGCCTCCGGCGCCCCCTCCGCCACCCCCGCCAGTGTCGGCGCCCGCGGCCGAGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCGCGCCCCCCGCCTCCGCCGCCACTATCGCCGCGGCGGCGGCCACCGCCGTCGTAGCCCCAACCTCGACGGTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCGTGGCCCCGGTCGCGTCTGCCTTGGAGAAGAAGACAAAGAGCAAGGGGCCCTACATCTGCGCTCTGTGCGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAAGGAGTTCAAGAACGGCTACAATCTCCGGAGGCACGAAGCCATCCACACGGGAGCCAAGGCCGGCCGGGTCC  592

Query    1  --------------------------ATGGTGCCCCTGAGCCTCCTGAGCGTGCCCCAGCTGAGCGGAGCCGGC  48
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCTCGGGTGCTATGAAGATGCCGACCATGGTGCCCCTGAGCCTCCTGAGCGTGCCCCAGCTGAGCGGAGCCGGC  666

Query   49  GGGGGAGGGGGAGAGGCGGGTGCCGGCGGCGGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGACCGC  122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGGGGAGGGGGAGAGGCGGGTGCCGGCGGCGGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGACCGC  740

Query  123  CTCGGGGAAGCGCATCCGGAAGAACCATGCCTGCGAGATGTGTGGCAAGGCCTTCCGCGACGTCTACCACCTGA  196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTCGGGGAAGCGCATCCGGAAGAACCATGCCTGCGAGATGTGTGGCAAGGCCTTCCGCGACGTCTACCACCTGA  814

Query  197  ACCGACACAAGCTGTCGCACTCGGACGAGAAGCCCTACCAGTGCCCGGTGTGCCAGCAGCGCTTCAAGCGCAAG  270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACCGACACAAGCTGTCGCACTCGGACGAGAAGCCCTACCAGTGCCCGGTGTGCCAGCAGCGCTTCAAGCGCAAG  888

Query  271  GACCGCATGAGCTACCACGTGCGCTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCACTGTGGCAA  344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GACCGCATGAGCTACCACGTGCGCTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCACTGTGGCAA  962

Query  345  GAGCTTCTCCCGGCCGGATCACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAACGGCCCTTCAAATGTG  418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAGCTTCTCCCGGCCGGATCACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAACGGCCCTTCAAATGTG  1036

Query  419  AGAAATGTGAGGCAGCTTTCGCCACGAAGGATCGGCTGCGGGCGCACACAGTACGACACGAGGAGAAAGTGCCA  492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGAAATGTGAGGCAGCTTTCGCCACGAAGGATCGGCTGCGGGCGCACACAGTACGACACGAGGAGAAAGTGCCA  1110

Query  493  TGTCACGTGTGTGGCAAGATGCTGAGCTCGGCTTATATTTCGGACCACATGAAGGTGCACAGCCAGGGTCCTCA  566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGTCACGTGTGTGGCAAGATGCTGAGCTCGGCTTATATTTCGGACCACATGAAGGTGCACAGCCAGGGTCCTCA  1184

Query  567  CCATGTCTGTGAGCTCTGCAACAAAGGCTTCACCACGGCAGCATACCTGCGCATCCACGCGGTGAAG---GACC  637
            |||||||||||||||||||||||||||                |||             .|||||.|   |.||
Sbjct 1185  CCATGTCTGTGAGCTCTGCAACAAAGG----------------TAC-------------TGGTGAGGTTTGTCC  1229

Query  638  ACGGGCTCCAGGC-CCCGCGG--GCTGACCGCATCCTGTGCAAGCTGTGCAGCGTGCACTGCA-----AGACCC  703
            |..|||    ||| .|.||||  || |.|.|||.|   .|||      |||||| |||  |||     || |||
Sbjct 1230  AATGGC----GGCGGCAGCGGCAGC-GGCGGCAGC---GGCA------GCAGCG-GCA--GCAGTAGCAG-CCC  1285

Query  704  CTGCC-CAGCTGGCCGGCCACATGCAGACCCATCTGGGG----GGGGCCGCCCCCCCTGTCCCGGGAGACGCCC  772
            ||.|| ||||||  .||.|.|       ||..||.||||    ||||..|     |||||     |||    |.
Sbjct 1286  CTCCCACAGCTG--TGGGCTC-------CCTCTCGGGGGCGGAGGGGGTG-----CCTGT-----GAG----CT  1336

Query  773  CCCAGCCACAGCCCACCTGC--------  792
            |.|||||||..|||.||  |        
Sbjct 1337  CTCAGCCACTTCCCTCC--CAACCCTGG  1362