Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11019
- Subject:
- NM_033580.3
- Aligned Length:
- 2793
- Identities:
- 162
- Gaps:
- 2613
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGCGCAGCAGCGTGAAGCTAGGGAGCAGGACCCCGTGGAGGCAAGTACTCTTTCCCTTCTTGCTGCCTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTCTGCACGGGGCTCTCAGAGCAAGTCCGGTACTCTATTCCGGAAGAAATGGCCATGGGTTCAGTCGTGGGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCTCGCTGAGGACCTGGGGCTGCCTGTTCAGGACTTACTGACAAGAAACCTTAGAGTTATTGCAGAGAAACCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATCTTTCTGTGAACCCAGAGAACGGGAACATAGTTGTGAGCGACAGAATAGACCGAGAGTTTCTCTGCTTCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGCCCTCTGTGCGTCCTGCCCTTAGAGATTGTGGCAGAAAATCCCCTAAACGTTTTTCACGTCAGCGTGGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAGAAGATATAAATGATAACCCTCCCCGTTTCCTCCAAAATAGCATTGTTTTGCAAATCAATGAACTTGCGATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAGGCACTAGGTTTGGCCTGGAATCTGCCATAGATGCAGATGTAGGGCTGAACTCTCTCCAGAGTTACCAACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGTTTGAATGAGCACTTCTCTCTGGTGGTAAAGGACAACACTGAAGGAAAGGATGCCCCCGAATTAGTGTTGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAAGCCTCTGGACAGGGAAAAACAGAGCTCCCAGCTCTTGGTCCTAACCGCAGTAGATGGGGGAGAACCAGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTAACGGGCACCGCTCAGATTCAGATCGAGGTCACTGATGCCAATGATAACCCCCCAGTGTTCAGCCAAAGTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTACAAAGTCAGTCTTAGAGAGGACATGGCCGCAGGCACGTCTGTGCTAACAGTGATAGCCACTGACCAGGATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGGTGTCAACGCAGAAGTCACCTACTCCTTCAAATCACTAGGAGAAGATATTAGAGATAAGTTTATCCTAGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATCAAAGTGGAGAAATTAAATCCAAAGGCCCTATTGACTTTGAAACCAAGAGGACTTACACCATGAACATAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCCAAGGACGGTGGAGGCATGGCCTCAGAATGTAAAGTTGTAGTGGAAATTCTCGATGAGAACGACAATGCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGAAGTGGTTTTTACTTCCGTGTCCAATTCTATAACCGAAGATGCAGAACCGGGGACAGTGGTGGCTCTGTTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAACGTATGATAAAGATTCAGAAGAAAATGGAAGAGTGAGTTGCTTCGTAAAAGAAACGGTTCCTTTTAGGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGAATCTTCTGCCAGCAATTACTATAAGCTTGTAACAGATGGGATCCTGGACCGGGAGCAGACTCCAGAGTACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACGTCACCATCATCGCCACTGATAAAGGCAAGCCCCCTCTCTCTTCCAGCACAAGCGTTACCCTGCATGTTGGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATATCAATGACAATGCTCCAGTTTTCCACCAGACCTCCTATTTGATCCAAGTGGCTGAGAACAACCCTCCTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCTTCCATTGCTCAGGTCAGCGCCTTCGACCCGGATTTGGGATCCAATGGTTTCATCTCCTACTCCATCATAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAGCGACCTAGAGCCTAAATCACTGTGGTCCTACGTGTCGGTGAACCAGGATAGTGGCGTGGTGTTCGCGCAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGCGCCTTCGACCACGAACAGCTGCGCTCCTTCCAGCTGACACTGCAGGCGCGCGACCAGGGAAAGCCCTCGCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGCGCCAACGTGAGCATGCGGGTGCTGGTGGGTGACCGCAACGACAACGCGCCACGCGTGCTGTATCCCACAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCGAGCCCGACGGCTCTGCGCTCTTCGACATGGTGCCGCGTGCTGCCGAGCCCGGATACCTGGTCACCAAAGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTGGCGGTGGATGCAGACTCTGGACACAATGCCTGGCTATCTTACCACGTGCTGCAGGCCAGCGATCCCGGGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTTCAGCCTGGGACTGCGCACAGGCGAGGTGCGCACAGCGCGTGCCCTGGGAGACAGGGACTCAGCGCGGCAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCCTTCTGGTCGCTGTGCGTGATGGTGGACAACCACCGCTCTCGGCTACAGCCACGCTGCACCTCATCTTCGCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GACAGCCTGCAGGAGGTCCTGCCAGACCTCAGAGATGAACCTTTGCTGTCTGACTCCCAAAGTGAGCTTCAGTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTACCTGGTGGTGGCCTTGGCCTTGGTCTCAGTGCTCTTTCTTTTCGTTGTGATCCTGGCCATTGTCCTTCGCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTCGACAGTCCCATGGTCCTGCTGTCTCAGACTATTTTCAGTCGGGCCTCTGCTGTAAGACGAGACCAGAGGTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCTCTCAACTACAGCGAGGGGACTCTTCCTTATTCCTACAATCTCTATGTTGCCTCCAATTGTCAAAAGACAAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTCTCAATTTCTTACCTTGACTCCAGAAATGGTCCCTCCGCGAGACCTTTGTACGGAAGCTTCTGTAGCAGTGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTGTCGCTGAGGAGAATAACAAGATAGTCTCGGATTCTATTGCTTCTAATCACCAAGCCCCGCCCAACACTGAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGGCGTTTCTCTCAAGCCCAGAGACCCGGCACGAGCGGATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGATGGGAGCTCTA 2590
Query 1 -----------------------ATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGTGCCC 51
|||||..|||||||.||.||||||||||||||.|||||||||||||||||.
Sbjct 2591 CCCTGGGAGGGGGCGCTGGCACCATGGGTCTGAGCGCTCGATACGGACCCCAGTTTACCCTGCAGCACGTGCCT 2664
Query 52 GACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAA 125
||||||||||||||.||.||||||||.||||||||||||||.||||||||.||.||||||||.||.||||||||
Sbjct 2665 GACTACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAA 2738
Query 126 GGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAG 180
|||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||||
Sbjct 2739 GGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAGAAAGAGAAGAAG 2793
