Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11320
- Subject:
- XM_017319016.1
- Aligned Length:
- 1654
- Identities:
- 685
- Gaps:
- 890
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGCTGGTGCAGGGGCAGAGCGCTCCGGTGGGCATGAAGGCTGAGGGCTTTGTGGATGCCCTGCACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTCCGGCAGATTGCTGCTAAAATCGATTCAATTCCTCACTTGAATAATTCCACACCTCTGGTGGACCCCTCAG 148
Query 1 ---------------------------------ATGCCTCCTA-----TAGGTAACCAGTTAGGGGCCTTGGTA 36
||| | ||||||||||||||||||||||||||
Sbjct 149 TGTACGGATACGGAGTACAGAAGCGGGCCCTGGATG------ATGGAGTAGGTAACCAGTTAGGGGCCTTGGTA 216
Query 37 CATCAAAGGACGGTAATAACGGAAGAATTCAAAGTGCCTGACAAAATGGTTGGATTTATTATCGGCAGGGGAGG 110
|||||||||.|.||||||||.||||||||||||||||||||.||||||||||||||||||||.|||||||||||
Sbjct 217 CATCAAAGGGCAGTAATAACAGAAGAATTCAAAGTGCCTGATAAAATGGTTGGATTTATTATTGGCAGGGGAGG 290
Query 111 TGAGCAGATTTCACGGATTCAAGCAGAATCTGGTTGCAAAATTCAGATTGCTTCAGAGAGTTCTGGGATTCCAG 184
|||||||||||||||.|||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||
Sbjct 291 TGAGCAGATTTCACGAATTCAAGCAGAATCTGGGTGCAAAATTCAGATTGCCTCAGAGAGTTCTGGGATTCCAG 364
Query 185 AGAGGCCCTGTGTACTTACCGGAACCCCAGAAAGTATTGAACAAGCCAAACGGCTCCTGGGACAGATTGTGGAC 258
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.
Sbjct 365 AGAGGCCCTGTGTACTTACCGGAACCCCAGAAAGTATTGAACAAGCCAAACGGCTCCTGGGGCAGATCGTGGAT 438
Query 259 CGCTGTCGAAATGGACCTGGCTTTCATAATGACATAGACAGCAACAGCACAATCCAGGAGATTCTCATTCCCGC 332
||.|||||.|||||.|||||||||||.||.||.||.||..|||||||||||||||||||..||||.||.||.||
Sbjct 439 CGATGTCGGAATGGGCCTGGCTTTCACAACGATATGGATGGCAACAGCACAATCCAGGAACTTCTTATCCCTGC 512
Query 333 ATCTAAAGTGGGTCTGGTCATCGGCAGAGGAGGGGAAACAATCAAGCAGTTGCAGGAGCGGACAGGGGTGAAGA 406
||||||||||||.|||||||||||||.||||||||||||.||||||||||||||||||||.||.||.|||||.|
Sbjct 513 ATCTAAAGTGGGGCTGGTCATCGGCAAAGGAGGGGAAACGATCAAGCAGTTGCAGGAGCGAACGGGTGTGAAAA 586
Query 407 TGGTCATGATCCAGGATGGCCCATTGCCCACGGGAGCAGACAAGCCTCTTCGTATCACTGGAGATGCATTTAAA 480
||||||||||||||||||||||..||||.||.|||||||||||||||||.||.|||||||||||..||||||||
Sbjct 587 TGGTCATGATCCAGGATGGCCCGCTGCCTACAGGAGCAGACAAGCCTCTCCGCATCACTGGAGACCCATTTAAA 660
Query 481 GTACAGCAAGCAAGAGAAATGGTACTAGAGATTATCCGAGAAAAAGACCAAGCTGACTTTCGGGGTGTACGCGG 554
|||||||||||||||||||||||.|||||||||||||||||.|||||.||.||||||||.||||||||.|||.|
Sbjct 661 GTACAGCAAGCAAGAGAAATGGTTCTAGAGATTATCCGAGAGAAAGATCAGGCTGACTTCCGGGGTGTGCGCAG 734
Query 555 CGATTTCAACTCTCGAATGGGAGGAGGCAGTATAGAGGTATCTGTGCCTAGGTTTGCTGTGGGGATTGTAATAG 628
||||||||.|||.|||...||.|||||.|||||||||||.||||||||||||||||.|||.||||||||.||||
Sbjct 735 CGATTTCACCTCCCGAGCAGGCGGAGGTAGTATAGAGGTGTCTGTGCCTAGGTTTGTTGTTGGGATTGTCATAG 808
Query 629 GAAGAAACGGGGAAATGATCAAAAAGATCCAGAATGATGCTGGTGTGAGGATTCAGTTTAAACCAGATGATGGG 702
||||.|||||.||||||||.||.|||||||||||.||.||||||||||||||.||.||.|||||||||||.|||
Sbjct 809 GAAGGAACGGAGAAATGATTAAGAAGATCCAGAACGACGCTGGTGTGAGGATCCAATTCAAACCAGATGACGGG 882
Query 703 ATTAGTCCAGAATATTACAGA-CA--GCAGGTC----GCTTTCTACGGACAGA----CGTTAG--GGCAG---- 759
|||||||||||| ||| || ||||||| ||..|| |||| .||.|| .||||
Sbjct 883 ATTAGTCCAGAA------AGAGCAGCGCAGGTCATGGGCCCTC------CAGATCGGTGTCAGCATGCAGCTCG 944
Query 760 ------------GCGCAGGCCCACAGC-CAGGAGCAG------------------------------------- 783
||.||..|.|||.|| ||||| .||
Sbjct 945 CATCATCAATGAGCTCATTCTCACGGCACAGGA-AAGAGAGATCCTTGGTGGCCTCACAGTAACAAGAGGAAGA 1017
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1018 GGCCGAGGCCGTAGTGACTGGAGTGTGGGCACTCCTGGGGGCGTCCAGGAAATTACGTACACAGTGCCAGCTGA 1091
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1092 TAAGTGCGGCCTTGTGATAGGCAAAGGGGGCGAGAACATCAAAAGCATCAACCAGCAATCAGGTGCCCATGTGG 1165
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1166 AGCTTCAGCGGAACCCCCCTCCTAACACCGACCCTAACCTGCGGATATTTACCATCAGGGGTGCTCCTCAGCAG 1239
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1240 ATGGAGGTGGCCAGGCATCTCATAGATGAGAAAGTTGGCGGTGCCAGCCTCGGAGCCCCTGCAGCCTTCGGACA 1313
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1314 GAGCCCCTTCAGCCAGCCACCAGCCGCACCACATCAAAACACCTTTCCTCCCAGGGGCTTCCCCAACATCGCAG 1387
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1388 CTAAAGTTAATGGGAATCCCCACAGCACCCCTGTGAGTGGCCCTCCAGCTTTTCTGACCCAAGGCTGGGGCAGC 1461
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1462 ACTTACCAGGCTTGGCAGCAGCCTACACAACAAGTCCCAAGTCATCCCACCAGTGCTGCCCCACAGGCCAGCTC 1535
Query 784 -------------------------------------------------------------------------- 783
Sbjct 1536 CCCCCCAGACTACACGATGGCCTGGGCTGAGTACTACAGGCAGCAGGCCGCCTTCTATGGGCAGACTTTAGGGC 1609
Query 784 -------------------------- 783
Sbjct 1610 AGGCTCAGGCCCACAGCCAGGAGCAG 1635
