Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11343
- Subject:
- XM_017028122.2
- Aligned Length:
- 1827
- Identities:
- 715
- Gaps:
- 1083
Alignment
Query 1 ------------------------------------------------------------ATGCATGGATCGCC 14
||||.|||||||||
Sbjct 1 ATGGTAGGCGTCCCTGGAGCGGCCGCCTTCCAGCTTGGTCCTGAGAAAAGGGTGCCAGCGATGCCTGGATCGCC 74
Query 15 TGTGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCACCATGCCACCCCTCCCACCAATAAATCCTGGAGGAC 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGTGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCACCATGCCACCCCTCCCACCAATAAATCCTGGAGGAC 148
Query 89 CGAGGCCAGTGTCCTTCACTCCTACTGCATTAAGCAATGGCATCAACCATTCTCCTCCTACCCTGAATGGTGCC 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGAGGCCAGTGTCCTTCACTCCTACTGCATTAAGCAATGGCATCAACCATTCTCCTCCTACCCTGAATGGTGCC 222
Query 163 CCATCACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTCCACATCATCTGCACTCACAAATCAGCAATTGCC 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCATCACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTCCACATCATCTGCACTCACAAATCAGCAATTGCC 296
Query 237 AGCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCTTACCACTCTGCAACAGTTTGGCAATGACA 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCTTACCACTCTGCAACAGTTTGGCAATGACA 370
Query 311 TCTCCCCTGAGATTGGGGAGAAGGTGCGGACTCTTGTTCTTGCACTGGTGAACTCAACAGTGACAATTGAGGAA 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTCCCCTGAGATTGGGGAGAAGGTGCGGACTCTTGTTCTTGCACTGGTGAACTCAACAGTGACAATTGAGGAA 444
Query 385 TTCCACTGTAAGCTCCAAGAAGCCACAAACTTTCCCCTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAACCT 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCCACTGTAAGCTCCAAGAAGCCACAAACTTTCCCCTTCGTCCTTTTGTGATTCCATTTCTCAAGGCCAACCT 518
Query 459 GCCCCTGCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCTCAGC 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCCCTGCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGCCAAGCAGACCCCATCCCAGTACCTGGCTCAGC 592
Query 533 ACGAACACCTTCTGCTCAACACAAGCATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGA 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACGAACACCTTCTGCTCAACACAAGCATTGCATCGCCTGCTGACTCGTCAGAGTTGCTCATGGAGGTGCACGGA 666
Query 607 AATGGGAAGAGGCCCAGTCCAGAGAG-------CTGCATA------ATACATCTAAAAT--CT-ATGGGAGTAG 664
|||||||||||||||||||||||||| ..|.||| |||.|...|.||| || .|| ||
Sbjct 667 AATGGGAAGAGGCCCAGTCCAGAGAGGAGAGAAGAGAATAGTTTTGATAGAGACACAATTGCTCCTG-----AG 735
Query 665 CTTCCAGACA--TGAGTATTTTTCGGGAACTCTTCAGATGCCTGCACACCCGGTA-AGAAACT-CTACTCTAGA 734
|.|||.|.|| .|||||| |.|| |.|||| .|||||.| |.|||.| || | ||.||||
Sbjct 736 CCTCCTGCCAAGAGAGTAT-------GTAC-CATCAG--CCCTGCTC-CTCGGCACAG----TCCTGCTCT--- 791
Query 735 GAATTTATGGGTCGACTGTTCCAGAAGCCTCAGGAGTACAG-------------TTCTGCCTTTTCCT------ 789
.|||||.|| |||||.||.|.|.| |.||.|| |||
Sbjct 792 -------------CACTGTGCC-----CCTCATGAATCCCGGGGGCCAATTCCATCCTACC----CCTCCACCT 843
Query 790 -------------------------------------------------------------------------- 789
Sbjct 844 CTTCAGCATTACACCTTAGAGGATATTGCAACTTCTCACCTGTATCGGGAACCCAACAAGATGCTAGAGCATCG 917
Query 790 -------------------------------------------------------------------------- 789
Sbjct 918 AGAAGTTCGTGATAGACACCACAGTCTTGGTCTAAATGGAGGCTATCAAGATGAGTTGGTAGATCATCGTTTGA 991
Query 790 -------------------------------------------------------------------------- 789
Sbjct 992 CAGAAAGGGAATGGGCTGATGAATGGAAACATCTTGACCATGCGCTGAATTGCATTATGGAAATGGTAGAGAAA 1065
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1066 ACAAGGCGCTCTATGGCAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTCAACTACTGGAAAAGACG 1139
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1140 GTACAATGAAAACACAGAGCTGAGGAAAACGGGGACCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGCAG 1213
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1214 ATTCTCTCAGCAATGATTCTCAGAGAGAGTTCAACAGCAGGCCAGGTACAGGATACGTACCTGTGGAGTTTTGG 1287
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1288 AAAAAAACAGAAGCTGTGAATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGAAGGCCGTCGCTGAGGCAGA 1361
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1362 GCAGAAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAATGGAGCAAACCATAGCGGATGTCAAGCGGCAGG 1435
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1436 CCGCAGAGGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTCCACGGAGAACTGCTGGAACTGTGGCCGCAAA 1509
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1510 GCCAGCGAGACATGCAGTGGCTGCAATATCGCGCGATACTGTGGCTCTTTCTGCCAGCACAAGGACTGGGAGCG 1583
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1584 GCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCAGAGCCCCCACGGCCAGGGCCGGCCGCTGCTTCCTGTAG 1657
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1658 GCAGGGGCTCCTCTGCCAGGTCCGCCGACTGCAGCGTGCCCAGCCCAGCCCTCGACAAGACCTCGGCAACCACA 1731
Query 790 --------------------------------------------------- 789
Sbjct 1732 TCGCGTTCCTCAACACCTGCTTCTGTGACAGCTATCGACACCAACGGACTC 1782
