Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11570
- Subject:
- NM_020144.5
- Aligned Length:
- 1911
- Identities:
- 739
- Gaps:
- 1056
Alignment
Query 1 ---ATGCCGTTTCCAGTTACAACACAGGGATCACAACAAACACAACCGCCACAGAAGCACTATGGCATTACTTC 71
|||||||||||.||.|||||.||||||.|||..||..|....|||||.|.|||.|.|||.|||.|..|.||
Sbjct 1 ATGATGCCGTTTCCGGTGACAACCCAGGGACCACCGCAGCCGGCGCCGCCGCCGAATCGCTACGGCGTCTCCTC 74
Query 72 TCCTATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCGTACTTACACAGAAACTAATTGAGACATTGAAACCCT 145
.||||||||..||||.|.||||||||||||.||||||.|.||.||.||||..|||||.||.||..|.|..||||
Sbjct 75 GCCTATCAGTCTAGCGGTCCCCAAGGAGACGGACTGCCTCCTCACCCAGAGGCTAATAGAAACCCTCAGGCCCT 148
Query 146 TTGGGGTTTTTGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTAATTTTGGGAAAACTAAATAACCTGGTAAAA 219
|.|||||.||.|||||||||||||||||||||||||||||||||.||||||.||||.|||||||.||||||||.
Sbjct 149 TCGGGGTCTTCGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTAGTTTTGGAAAAATTAAATAATCTGGTAAAG 222
Query 220 GAGTGGATACGAGAAATCAGTGAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGGAAAAATTTT 293
||.||||||||.|||||||||||||||||||.||||||.||.||||||||||||||.|||||||||||.|||||
Sbjct 223 GAATGGATACGCGAAATCAGTGAAAGCAAGAGTCTTCCCCAGTCTGTAATTGAAAACGTTGGAGGAAAGATTTT 296
Query 294 TACATTTGGATCTTACAGATTAGGAGTGCATACAAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACCAAGAC 367
|||.|||||.|||||||||||||||||.|||||.|||||.||.||||||||.||.|||||.|||||||||||.|
Sbjct 297 TACGTTTGGCTCTTACAGATTAGGAGTACATACGAAAGGCGCAGATATTGACGCCTTGTGCGTTGCACCAAGTC 370
Query 368 ATGTTGATCGAAGTGACTTTTTCACCTCATTCTATGATAAGTTGAAATTACAGGAAGAAGTAAAAGATTTAAGA 441
||||.||||||||.||||||||||||||||||||||.|||..|||||.|||||||.|||||.|||||||||||.
Sbjct 371 ATGTGGATCGAAGCGACTTTTTCACCTCATTCTATGCTAAACTGAAACTACAGGAGGAAGTGAAAGATTTAAGG 444
Query 442 GCTGTTGAAGAGGCATTCGTACCAGTTATTAAACTCTGTTTTGATGGGATAGAGATTGATATTTTGTTTGCAAG 515
|||||.||.||||||||.||.||||||||.|||||.|||||||||||||||||||||||||||||.||||||||
Sbjct 445 GCTGTCGAGGAGGCATTTGTGCCAGTTATCAAACTGTGTTTTGATGGGATAGAGATTGATATTTTATTTGCAAG 518
Query 516 ATTAGCACTGCAGACAATTCCTGAAGATTTGGATCTACGAGATGACAGTCTGCTAAAAAATTTAGATATAAGAT 589
|||||||||.|||||.|||||.|||||||||||..||.|||||||||||||.||.|||||||||||.||.||||
Sbjct 519 ATTAGCACTACAGACTATTCCAGAAGATTTGGACTTAAGAGATGACAGTCTACTTAAAAATTTAGACATTAGAT 592
Query 590 GTATAAGAAGTCTTAACGGTTGCAGGGTAACCGATGAAATTTTACATCTAGTACCAAACATTGACAACTTCAGG 663
|.||||||||.|||||.||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 593 GCATAAGAAGCCTTAATGGTTGCCGGGTAACCGATGAAATTTTACATCTAGTGCCAAACATTGACAACTTCAGG 666
Query 664 TTAACTCTGAGAGCTATCAAACTATGGGCCAAACGCCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGG 737
.|.|||||||||||.||||||||.||||||||..|||||||.|||||||||||||||||||||||||||||.||
Sbjct 667 CTGACTCTGAGAGCCATCAAACTGTGGGCCAAGTGCCACAATATCTATTCCAATATATTAGGTTTCCTCGGAGG 740
Query 738 TGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATA 811
||||||||||||.||||||||||||||||||||.||||||||||||||||||.||||.|||||||||||||..|
Sbjct 741 TGTTTCCTGGGCCATGCTAGTAGCAAGAACTTGTCAGCTTTATCCAAATGCAGTAGCGTCAACTCTTGTACGGA 814
Query 812 AATTTTTCTTGGTATTTTCTAAATGGTA------------TGTGTT--------------TAGA--------TT 851
||||.||||||||||||||..|||||.| .||||| .||| ||
Sbjct 815 AATTCTTCTTGGTATTTTCAGAATGGGAATGGCCAAACCCAGTGTTACTGAAGGAGCCTGAAGAACGGAATCTT 888
Query 852 A---------TAT------------------------------------------------------------- 855
| |||
Sbjct 889 AATTTGCCTGTATGGGACCCAAGAGTAAATCCCAGTGATAGGTACCATCTTATGCCTATCATCACACCAGCATA 962
Query 856 -------------------------------------------------------------------------- 855
Sbjct 963 CCCACAGCAGAACTCCACATACAACGTGTCTATTTCAACCAGGATGGTCATGATTGAGGAGTTTAAACAGGGGC 1036
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1037 TTGCTATCACACACGAGATTTTGCTAAGTAAGGCAGAGTGGTCCAAACTCTTTGAAGCTCCAAGCTTCTTTCAA 1110
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1111 AAGTACAAGCATTATATTGTACTTCTGGCAAGTGCATCAACAGAAAAACAACATTTAGAATGGGTGGGCTTGGT 1184
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1185 GGAATCAAAGATCCGAATCCTGGTTGGGAGCTTGGAGAAGAATGAATTTATTACACTGGCACATGTGAATCCAC 1258
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1259 AGTCATTTCCAGCACCCAAAGAAAATCCTGATATGGAAGAATTTCGTACAATGTGGGTGATTGGGTTAGGGCTA 1332
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1333 AAAAAGCCAGATAATTCTGAAATTCTCAGCATTGATCTCACCTATGATATCCAGTCTTTCACAGATACTGTTTA 1406
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1407 TAGGCAAGCAGTGAATAGTAAGATGTTTGAGATGGGTATGAAAATTACTGCAATGCATTTAAGAAGAAAGGAAC 1480
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1481 TTCACCAGCTGCTGCCTCATCATGTGCTTCAGGACAAGAAAGCACACTCAACAGAAGGTAGAAGATTGACAGAT 1554
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1555 TTGAACGACAGCAGCTTTGACTTGTCTGCAGGCTGTGAAAACAGCATGTCTGTGCCTTCATCTACTAGCACTAT 1628
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1629 GAAGACAGGCCCATTGATTAGCAGTTCTCAGGGTAGAAACAGTCCTGCCTTGGCTGTAATGACAGCATCTGTGG 1702
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1703 CTAACATACAGGCTACTGAATTTTCCTTGCAACAGGTGAATACCAATGAAAGTTCAGGGGTTGCATTAAACGAA 1776
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1777 AGTATTCCTCACGCTGTCTCTCAGCCTGCCATTTCTCCATCACCAAAGGCCATGGTCGCCAGAGTTGTTTCTTC 1850
Query 856 ------------------------------------------------------------- 855
Sbjct 1851 AACATGTCTCATAAGCCATCCAGACCTTCAGGAAACTCAGCAACAAACATATCTAATCCTA 1911
