Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11638
- Subject:
- XM_006719293.3
- Aligned Length:
- 2125
- Identities:
- 614
- Gaps:
- 1475
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCCGCCGACGTCTTCATGTGCTCCCCGCGCCGGCCTCGCAGCCGGGGCCGCCAGGTGCTGCTCAAGCCCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTGTCCGAGGACGACGACGACTCGGACACGGATGAGCCGTCCCCGCCGCCCGCCTCCGGCGCGGCCACCCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGGCCCACGCGAGCGCCGCGCCACCGCCGCCTCGGGCCGGGCCGGGCCGCGAGGAACCTCCGCGCCGCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGATCATCCACAGCGGCCACTTCATGGTGTCGTCGCCGCACCGAGAGCACCCGCCCAAGAAGGGCTACGATTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGACACGGTCAACAAACAGACGTGCCAGACCTACAGCTTCGGCAAGACTAGCTCCTGCCACCTGTCCATCGACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTCGCTCACCAAGCTCTTCGAGTGCATGACTTTGGCCTACAGTGGGAAGTTGGTGTCTCCAAAGTGGAAGAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCAAGGGCCTGAAGCTACAGTGGAGAGACAAGATCCGGCTCAATAATGCCATCTGGCGGGCCTGGTACATGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTATCTGGAGAAGCGCAAGAATCCTGTGTGCCACTTTGTGACACCCCTGGACGGCTCTGTGGACGTAGACGAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCGCCGGCCGGAGGCCATCACCACGGAAGGGAAGTACTGGAAGAGCCGCATCGAGATTGTGATCCGGGAGTAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAAGTGGAGAACCTACTTCAAGAAAAGGCTACAGCAGCACAAGGATGAGGACCTCTCCAGCCTGGTCCAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGATGACATGCTGTATTGGCACAAGCACGGGGATGGATGGAAGACCCCCGTCCCCATGGAGGAGGATCCCCTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGACACAGACATGCTCATGTCGGAATTCAGCGACACCCTCTTCTCCACACTTTCTTCACACCAGCCGGTGGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGCCCAATCCCCGGGAAATAGCACATCTGGGAAATGCAGACATGATCCAGCCGGGACTGATTCCTTTGCAGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAACCTGGACTTCATGGACACCTTTGAGCCTTTCCAGGACCTCTTCTCTTCTAGCCGCTCCATTTTTGGCTCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCTACCTGCATCTGCCTCAGCACCTGTACCAGATCCCAACAACCCACCTGCACAGGAGAGCATCCTGCCGACC 1110
Query 1 ---------------------------------------------------------------------ATGGA 5
|||||
Sbjct 1111 ACAGCCCTCCCCACTGTGAGCCTTCCTGACAGCCTCATCGCGCCCCCTACCGCCCCATCCCTGGCTCACATGGA 1184
Query 6 TGGGCAGGGCTGTGAACACACCTCCCGGACTGAGGACCCGTTTATCCAGCCCACGGACTTCGGTCCCTCAGAGC 79
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGAGCAGGGCTGTGAACACACCTCCCGGACTGAGGACCCGTTTATCCAGCCCACGGACTTCGGTCCCTCAGAGC 1258
Query 80 CGCCACTGAGTGTCCCG------------------------------------------------------CCG 99
||||||||||||||||| |||
Sbjct 1259 CGCCACTGAGTGTCCCGCAGCCCTTCCTCCCTGTCTTCACCATGCCCCTGCTGTCTCCCAGCCCCGCCCCACCG 1332
Query 100 CCCATCTCCCCCGTGTTACCATTAGTTCCTCCTCCTGCCACTGCCCTGAACCCCCCGGCTCCACCCACCTTCCA 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCATCTCCCCCGTGTTACCATTAGTTCCTCCTCCTGCCACTGCCCTGAACCCCCCGGCTCCACCCACCTTCCA 1406
Query 174 TCAGCCACAGAAGTTTGCTGGAGTCAACAAAGCGCCGTCTGTCATCACCCACACGGCCTCTGCCACCCTCACCC 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCAGCCACAGAAGTTTGCTGGAGTCAACAAAGCGCCGTCTGTCATCACCCACACGGCCTCTGCCACCCTCACCC 1480
Query 248 ACGATGCCCCCGCCACCACCTTTAGCCAGAGTCAGGGCCTTGTGATCACCACCCATCACCCTGCCCCGTCAGCG 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACGATGCCCCCGCCACCACCTTTAGCCAGAGTCAGGGCCTTGTGATCACCACCCATCACCCTGCCCCGTCAGCG 1554
Query 322 GCCCCTTGTGGGCTGGCACTGTCTCCTGTCACCCGGCCTCCCCAGCCACGGTTAACTTTTGTGCACCCCAAACC 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCCCCTTGTGGGCTGGCACTGTCTCCTGTCACCCGGCCTCCCCAGCCACGGTTAACTTTTGTGCACCCCAAACC 1628
Query 396 TGTATCCTTGACTGGGGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCT 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TGTATCCTTGACTGGGGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCT 1702
Query 470 TGGTGTTGAAGAATGCCCGTATCGCCCCAGGTG-------AG-------CCAGGCGGGGA----GAC-TCAG-- 522
||||||||||||||||||||||||||||||.|| || .||.||||.|| ||| ||||
Sbjct 1703 TGGTGTTGAAGAATGCCCGTATCGCCCCAGCTGCCTTTTCAGGCCAACCACAAGCGGTGATCATGACGTCAGGG 1776
Query 523 -------------------TGCGGGGCTCC-CCCCGACCCAGAGGGATGTTTTC-------------CCATCCC 563
||..||.|||| ||..|.|||||....|.||..|| |||||.|
Sbjct 1777 CCTCTGAAGAGAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCATCGC 1850
Query 564 AAAGGCT---------------TT---------CAAACTTGTGAC---------------CACCACCA------ 592
.|.|||| || ||..||.||||| |||.|.||
Sbjct 1851 CAGGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCCGC 1924
Query 593 -----------------------CCA----------------CCCT-------GGTGTGCACG------TGCAT 614
||| |||| ||.|.|||.| |||||
Sbjct 1925 CTGCCCCCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAGACCCCCTGGGGAAGGGCGAGCAGGTCCCGCTGCAT 1998
Query 615 GCGCACA----------CAC-----------------------------------ATACACTTA--AA------ 635
|.|..|| ||| |||..||.| ||
Sbjct 1999 GGGGGCAGCCCCCAGGTCACTGTCACAGGGCCCAATTTTCAGGGAGTGAATAAGAATAATCTAAGGAAGCATGT 2072
Query 636 ---------TGAAACAA--AAGTGTCA-------------------------- 651
|||||.|| ||||| ||
Sbjct 2073 GTGTGCAGTTGAAAGAACCAAGTG-CAATACGTGGCTAGCAGCGAGCACCTCA 2124
