Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11816
- Subject:
- NM_001198793.1
- Aligned Length:
- 2121
- Identities:
- 1053
- Gaps:
- 1065
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACTGCCACTCTCCGCCCCTACCTGAGTGCCGTGCGGGCCACATTGCAGGCTGCCCTCTGCCTGGAGAACTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCTCCCAGGTTGTGGAACGACACAACAAGCCGGAAGTGGAAGTCAGGAGTAGCAAAGAGCTCCTGTTACAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGTGACCATCAGCAGGAATGAGAAGGAAAAGGTTCTGATTGAGGGCTCCATCAACTCTGTCCGGGTCAGCATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGTGAAACAGGCTGATGAGATCGAGAAGATTTTGTGCCACAAGTTCATGCGCTTCATGATGATGCGAGCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAACTTCTTTATCCTTCGAAGGAAGCCTGTGGAGCAGAAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCGGTGTCTCTTGCGCCGGAGGGGCTGGGTGGAGAAGAAGATGGTCCATCGCTCAGGCCCCACCCTGCTGCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCCAGAAGGATCTGGATAGCTCAGCGATGGGTGACAGTGACACCACTGAGGATGAGGATGAAGATGAGGACGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAGTTCCAGCCATCACAGCTGTTCGACTTCGATGATTTACTGAAATTTGATGACCTAGATGGAACACATGCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGATGGTGGGTCTATGTCTCAATCTCCGGAATTTGCCGTGGTTTGATGAGGTTGATGCCAACTCCTTCTTCCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCTGCTACTGCCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGGAGACAAGCAGCCCAAGAAACAGGAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAGGAGTACCTTAGCAACTTGG 814
Query 1 -----ATGGACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGTCCCTCTTCCTCCAG 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGTCCCTCTTCCTCCAG 888
Query 70 CGCTACTACCAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACAT 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGCTACTACCAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACAT 962
Query 144 CCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAG 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCCAG 1036
Query 218 GAGCCAAGTCCCGTGGACGAGGCATCATGTGCATGGACCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAAC 291
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAGCCAAGTCCCGCGGACGAGGCATCATGTGCATGGACCACCTGGAGGAGATGCTGAAGCTGGTGAACGGCAAC 1110
Query 292 CCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAAGTATATTGAGCGGCCCCTCCTCATCTTTGGCACCAA 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAAGTATATTGAGCGGCCCCTCCTCATCTTTGGCACCAA 1184
Query 366 GTTTGACCTCAGACAGTGGTTCCTGGTAACTGACTGGAACCCACTTACCGTGTGGTTCTACCGCGACAGCTATA 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTTTGACCTCAGACAGTGGTTCCTGGTAACTGACTGGAACCCACTTACCGTGTGGTTCTACCGCGACAGCTATA 1258
Query 440 TCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCTGTGCAACAACTCCATCCAG 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCTGTGCAACAACTCCATCCAG 1332
Query 514 AAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCA 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTAGCCAGAGGTTCCA 1406
Query 588 GGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGA 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGA 1480
Query 662 TCCACGCACTTCAGACCTCCCAGGACACCGTGCAATGTCGGAAGGCCAGCTTTGAGCTCTATGGCGCTGACTTC 735
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTATGGCGCTGACTTC 1554
Query 736 GTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGAGATCAACGCCAGCCCCACGATGGCACCCTCCACAGCAGT 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGAGATCAACGCCAGCCCCACGATGGCACCCTCCACAGCAGT 1628
Query 810 CACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGAGGCTGGACCGCAACT 883
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1629 CACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACT 1702
Query 884 GTGACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGGCTC 957
|||||||||||||||||||||||||||||||||
Sbjct 1703 GTGACACAGGAGCCTTTGAGCTCATCTATAAGC----------------------------------------- 1735
Query 958 CTGGTAGAGGGCTTCACCATCAAGAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCC 1031
Sbjct 1736 -------------------------------------------------------------------------- 1735
Query 1032 TCTGCTGACCCAGCGAGGCTCTGGGGAAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT 1105
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736 ---------------------------AGCCCGTCACCACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTT 1782
Query 1106 CTCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAAGGCCCTG 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1783 CTCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAAGGCCCTG 1856
Query 1180 TCGACCACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTT 1253
|||||||||||||||||||
Sbjct 1857 TCGACCACAGGCAAGGCCT------------------------------------------------------- 1875
Query 1254 CAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCGACCTG 1302
Sbjct 1876 ------------------------------------------------- 1875
