Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11953
- Subject:
- NM_001346462.2
- Aligned Length:
- 1706
- Identities:
- 741
- Gaps:
- 964
Alignment
Query 1 ATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATCAGACACTGAAGGCTGAACACACAAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTTGCAGAATGAACATGTAAAGTTACAAAATGAACTCAAGCACCTGTTTAATGAAAAGCAAACTCAGCAGGAAA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AACTTCAGCTCCTGCTTGAAGAACTAAGAGGAGAATTAGTAGAGAAAACTAAAGATTTAGAAGAAATGAAACTG 222
|||||||||
Sbjct 1 -----------------------------------------------------------------ATGAAACTG 9
Query 223 CAGATATTAACTCCACAAAAATTGGAATTGCTAAGAGCCCAAATACAACAAGAATTAGAAACTCCAATGAGAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10 CAGATATTAACTCCACAAAAATTGGAATTGCTAAGAGCCCAAATACAACAAGAATTAGAAACTCCAATGAGAGA 83
Query 297 ACGTTTTAGGAATCTAGATGAAGAGGTAGAAAAGTATAGAGCTGTATATAATAAGCTTCGCTATGAACATACAT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 84 ACGTTTTAGGAATCTAGATGAAGAGGTAGAAAAGTATAGAGCTGTATATAATAAGCTTCGCTATGAACATACAT 157
Query 371 TTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGTATGCACGTATTTTAGATGAAGGAAAAATAAAATATGAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 158 TTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGTATGCACGTATTTTAGATGAAGGAAAAATAAAATATGAA 231
Query 445 TCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAACTACGTAACCAGCTGCTTAATGTTGATCTCACAAAAGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 TCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAACTACGTAACCAGCTGCTTAATGTTGATCTCACAAAAGA 305
Query 519 CAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTATTTGTGTCAAAAATTAAAAGGTTTAGAGGCTGAAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 306 CAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTATTTGTGTCAAAAATTAAAAGGTTTAGAGGCTGAAG 379
Query 593 TAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCAGGTGGAAAATGCCCAAAGAATACAGGTGCGGCAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 380 TAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCAGGTGGAAAATGCCCAAAGAATACAGGTGCGGCAG 453
Query 667 TTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTGAAAAACAATCAGCTAATTTACGGGCAGAACGCTT 740
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 454 TTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTGAAAAACAATCAGCTAATTTACGGGCAGAACGTTT 527
Query 741 GGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTTTTAATTAATAAATTGCATAAAGCTGAACGAGAAA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 528 GGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTTTTAATTAATAAATTGCATAAAGCTGAACGAGAAA 601
Query 815 TAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACTGGAAATAACAGACATCAAACTGGAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 TAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACTGGAAATAACAGACATCAAACTGGAG 675
Query 889 ACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATAAGATTCAAAGTGAACTGGATGG--ATTACAGTCA 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 676 ACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATAAGATTCAAAGTGAACTGGATGGTAAT-------- 741
Query 961 GACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAAAGTGCTCTTAGTAGAAAAGGATCGTGAATTAATACG 1034
|||
Sbjct 742 ----ATG------------------------------------------------------------------- 744
Query 1035 TAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGTGGTATTACAAGATGAAAAGTTAGAACTCGAGA 1108
Sbjct 745 -------------------------------------------------------------------------- 744
Query 1109 ACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACATGATGTCTGGAGGCAATCTGAAAAGGATCAGTATGAA 1182
Sbjct 745 -------------------------------------------------------------------------- 744
Query 1183 GAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCACCAGGAAGGAGCTTCAGAGTGTTAGGTTAAAACTTCA 1256
Sbjct 745 -------------------------------------------------------------------------- 744
Query 1257 GCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAAAAAATGAAAATTCTGACCTAAAACAGCAAATCAGTA 1330
Sbjct 745 -------------------------------------------------------------------------- 744
Query 1331 GTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAGAATGACTTGCTGAATTCAAACCAAATGCTGAAGGAA 1404
Sbjct 745 -------------------------------------------------------------------------- 744
Query 1405 ATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAGAAGCCAAGCTGAAAAAGCGCAACTAGAAGCTGAAAA 1478
Sbjct 745 -------------------------------------------------------------------------- 744
Query 1479 GACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAAAGCATAAGCTTCATGAGCGTATCACAGACAGAGAAG 1552
Sbjct 745 -------------------------------------------------------------------------- 744
Query 1553 AAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCTGCAATTGCCCAGAAAAAGCTTGAACAGGATCTTGAG 1626
Sbjct 745 -------------------------------------------------------------------------- 744
Query 1627 TTGGGATGCCCTTCTGTGACTGATACATACAGAGAGAGTGTATTCCCCCCACCCCCATTGAAGAGAGATCTCTT 1700
Sbjct 745 -------------------------------------------------------------------------- 744
Query 1701 GAAG 1704
Sbjct 745 ---- 744
