Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11963
Subject:
XM_006720561.3
Aligned Length:
1296
Identities:
675
Gaps:
621

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATCATCCCCTCTCTAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCAGAACTTAGCCAAGAGTCTGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCTCCGGGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCTTGAAAGGCTACATTAAACATGAGGCAAGAAAAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAAATGAGAATCAGGATGAAAGTCAAACTTCTGCATCCTCTTGTGATGAGACTGAGATACAGATCAGCAACCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAGAAGCTGAGAGACAGCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTGCAAGACTGTCCGTGTGGACCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGACTCACAGAATCATGAAAAGCAGGAAAGCCAGGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCACCAGACG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCACCAAGAAGCTGAGAATGCTGTTTCCTCAGGTAAACGTGGAATAAATGGTAACAGAGATTCAAAGGTACCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCAGAAGGAAAGAAATCTCTCTACACAGATGAGTCATCCAAACCTGGAAAAAATAAAAGAACTGCAATCACTAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCCAAACTTTAAGAAGCTTCATGAAGCTCATTTTAAGGAAATGGAGTCCATTGATCAATATATTGAGAGAAAAA  592

Query    1  --------------------------ATGAATGAACTGA---AGCAGCCCATCAATAAGGGAGGGGTCAGGACT  45
                                      |||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct  593  AGAAACATTTTGAAGAACACAATTCCATGAATGAACTGAAGCAGCAGCCCATCAATAAGGGAGGGGTCAGGACT  666

Query   46  CCAGTACCTCCAAGAGGAAGACTCTCTGTGGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGCCGGTCTTG  119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCAGTACCTCCAAGAGGAAGACTCTCTGTGGCTTCTACTCCCATCAGCCAACGACGCTCGCAAGGCCGGTCTTG  740

Query  120  TGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTCTGCAGCTAAAACGG  193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAGGGGTCACTCAAGCGCTCTGCTATCTCTGCAGCTAAAACGG  814

Query  194  GTGTCAGGTTTTCAGCTGCTACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTCT  267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GTGTCAGGTTTTCAGCTGCTACTAAAGATAATGAGCATAAGCGTTCACTGACCAAGACTCCAGCCAGAAAGTCT  888

Query  268  GCACATGTGACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCAC  341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCACATGTGACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACACAAATTAAAGACCATCAC  962

Query  342  GGGGAATTCTGCTGCTGTTATTACCCCATTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAATAAGA  415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGGGAATTCTGCTGCTGTTATTACCCCATTCAAGTTGACAACTGAGGCAACGCAGACTCCAGTCTCCAATAAGA  1036

Query  416  AACCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCCCTCAACTATGAACCACACAAAGGAAAGCTAAAACCA  489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AACCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCCCTCAACTATGAACCACACAAAGGAAAGCTAAAACCA  1110

Query  490  TGGGGGCAATCTAAAGAAAATAATTATCTAAATCAACATGTCAACAGAATTAACTTCTACAAGAAAACTTACAA  563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGGGGGCAATCTAAAGAAAATAATTATCTAAATCAACATGTCAACAGAATTAACTTCTACAAGAAAACTTACAA  1184

Query  564  ACAACCCCATCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAGAAAGCAAAGG  637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ACAACCCCATCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAGCAAGAACGAAAGGAGAAGAAAGCAAAGG  1258

Query  638  TTTTGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGAT  675
            ||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TTTTGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGAT  1296