Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12575
• Subject: NM_177338.6
• Aligned Length: 1263
• Identities: 833
• Gaps: 342

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTCAGCTCCTTTCCAGTGGTTTTGCTGGAAACCATGTCTCACTACACAGATGAACCCAGATTTACCATAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACAGATAGACCTGCTCCAGCGTCTTCGGCGTACCGGGATGACCAAACATGAAATCCTTCATGCATTAGAAACTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGACCGTCTTGATCAAGAGCATAGTGATAAATTTGGAAGGAGGTCCAGCTACGGGGGAAGCTCATATGGGAAC  222

Query    1  ------------------------------------------------------------------ATGTCCCC  8
                                                                              ||||||||
Sbjct  223  AGTACCAACAACGTTCCAGCATCTTCCTCTACAGCCACAGCTTCCACGCAGACCCAGCACTCGGGAATGTCCCC  296

Query    9  GTCACCTAGCAACAGTTATGATACTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGC  82
            .|||||.|||||||||||.|||||.|||||||.|||||||||||||||||||||||||||||||||.|||||.|
Sbjct  297  ATCACCCAGCAACAGTTACGATACCTCCCCACTGCCTTGCACTACCAATCAAAATGGGAGGGAGAACAATGATC  370

Query   83  GATTATCTACATCCAATGGAAAGATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGT  156
            ||||.||.|||||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||.||.
Sbjct  371  GATTGTCCACATCCAATGGGAAGATGTCACCATCTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATATAGC  444

Query  157  TTTGAAGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGAT  230
            |||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  445  TTTGAGGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAGGAATTAATGAGGAGGGACAGCAGTGTGAT  518

Query  231  AAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCA  304
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  519  AAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGAATCA  592

Query  305  GTCAGAGCCGGATCTCTCATTGGCTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTAC  378
            |||||||.||.||||||||.||||||.||||||||||||||||.||||||||.|||||||||||.||.||.|||
Sbjct  593  GTCAGAGTCGAATCTCTCACTGGCTGCTGCAGCAGGGATCAGATCTGAGTGAGCAGAAGAAAAGGGCGTTCTAC  666

Query  379  CGATGGTATCAACTTGAGAAGACAAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGA  452
            ||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||
Sbjct  667  CGATGGTATCAACTTGAGAAGACAAACCCTGGGGCTACGCTAAGTATGAGACCTGCCCCCATTCCAATAGAGGA  740

Query  453  CCCTGAATGGAGACAAACGCCTCCCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGAT  526
            ||||||||||||||||||.||||||||||||||.||||||.||||.||.|||||.||.||||||||||||.|||
Sbjct  741  CCCTGAATGGAGACAAACACCTCCCCCAGTCTCCGCCACACCTGGAACCTTCCGGCTTCGACGAGGGAGTAGAT  814

Query  527  TTACCTGGAGAAAGGAGTGCCTGGCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAG  600
            ||||||||||||||||||||||.|||||.|||||||||||||||||||||||.||.||||||||||||||||||
Sbjct  815  TTACCTGGAGAAAGGAGTGCCTAGCTGTCATGGAAAGTTACTTCAATGAGAACCAGTACCCAGATGAAGCAAAG  888

Query  601  AGGGAAGAAATTGCAAACGCTTGCAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGT  674
            ||.|||||||||||.||.||||||||||||||.||||||||||||||||||||||||||.||.||||||.||||
Sbjct  889  AGAGAAGAAATTGCCAATGCTTGCAATGCAGTCATACAGAAGCCAGGCAAAAAGCTGTCTGACCTGGAACGAGT  962

Query  675  TACCTCCCTGAAAGTATATAATTGGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAA  748
            ||||||.||||||||||||||||||||||||||..||.||||||||||||||||.|||||||||||.|||||||
Sbjct  963  TACCTCTCTGAAAGTATATAATTGGTTTGCTAATCGACGGAAGGAGATCAAGAGAAGAGCCAATATCGCAGCAA  1036

Query  749  TCCTGGAGAGTCATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGAC  822
            |||||||||||||||||||||||||.|||||||||||||||||.||.||||||||.|||||.||||||||.|||
Sbjct 1037  TCCTGGAGAGTCATGGGATAGATGTACAGAGTCCAGGAGGCCATTCCAACAGTGACGATGTGGACGGGAACGAC  1110

Query  823  TACTCTGAGCAGGAT-ACTTGGCAAGTAC--GCAATGGGGAGGAGGAGGA--------GGGAAGAAGTTCAGAG  885
            |||||.||||||||| ||      ||.||  ||.||.|.||..|..|.||        .|..||..||..|||.
Sbjct 1111  TACTCCGAGCAGGATGAC------AGCACCAGCCATAGTGACCACCAAGATCCCATCTCGCTAGCTGTGGAGAT  1178

Query  886  GGAGGCAGAGAAGCAGA-------------------GAAGGTAG-----------AAGA-AGAG----CGGAGG  924
            ||.|||.|..||.||.|                   |.|||.||           |||| ||||    .|||.|
Sbjct 1179  GGCGGCCGTCAACCACACTATCTTGGCATTGGCCCGGCAGGGAGCCAATGAAATCAAGACAGAGGCCCTGGATG  1252

Query  925  ATC--  927
            ||.  
Sbjct 1253  ATGAC  1257