Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12575
- Subject:
- XR_001745594.1
- Aligned Length:
- 1751
- Identities:
- 896
- Gaps:
- 832
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTTGATATCAATATGGCGGTTGTCAGCCAGACAAAGACAGTCAGTCTGATGTGATTGAGACAAGGGAGGTTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAGGGGGAGACTGGGAGATAGGGGCCTCCCCTCCCCCTTCTCCTCTTCCTGCGCCGGCCTCAACCCCTCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCCCCTCCCGACGGGCGCCCCACGCGGAAGACACCCCTCCCCCTCCCGCCTTCCCTCCTCCCTATCTCAGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCGTACTGGGACGTTGGGGAGGGGGCTGTGCCGGGCGGAGAGAACTCAGCGAGGATTCTGAGAATGGTAGATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACGCAGATCATCTCTGGAAAGGATATTGATCCGCCTCATGTAAAGTATGCTTAGTTCCTTTCCAGTGGTTTTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGACTTCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCATAGTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACTAACAATGTCCCAGCATCTTCCT 592
Query 1 --------------------------------------ATGTCCCCGTCACCTAGCAACAGTTATGATACTTCC 36
||||||||||||||||||||||||||||||||||||
Sbjct 593 CTACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTATGATACTTCC 666
Query 37 CCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTC 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTC 740
Query 111 ACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATG 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATG 814
Query 185 TAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCC 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCC 888
Query 259 AATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTT 962
Query 333 GCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACC 1036
Query 407 CTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCA 1110
Query 481 GTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGT 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGT 1184
Query 555 TATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATG 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATG 1258
Query 629 CAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTT 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTT 1332
Query 703 GCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATT---GCAGCAATCCTGGAGAGTCATGGGATAGATGT 773
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1333 GCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGAAGCAGCAATCCTGGAGAGTCATGGGATAGATGT 1406
Query 774 GCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTGGC--- 844
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| .||||..|
Sbjct 1407 GCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGG-GACTTACCCTT 1479
Query 845 ----AAG--------TACGCAATGGGGAG-------GAGGAGG--AGGGAAGAA-------------------- 877
||| ||| |||| ||.||.| |||..||||
Sbjct 1480 TCCAAAGCTCTTTGATAC-------GGAGTTCCCCTGAAGATGACAGGTGAGAAACATACCCCTTATTTGTAAC 1546
Query 878 -----GTTCAGAGGGAGGCAGAGA------------AG-------CAGAG----AAGGTAGAAGA---AGAGC- 919
.|||||.|...|.|..|.| || ||.|| |..||..||.| .||||
Sbjct 1547 ACCATCTTCAGTGCCTGACGTACATCCTGCAATGCCAGCTTCCTTCACAGCTTTATTGTTTAACACATTGAGCT 1620
Query 920 ------GGAGGA-----TC------------------------------------------------------- 927
|||||| ||
Sbjct 1621 GCGCGGGGAGGACAGCTTCACACTAGTTCTAGGATGACAGTACGAGCCATAGTGACCACCAAGACCCCATCTCA 1694
Query 928 ------------------------------------------------- 927
Sbjct 1695 TTAGCTGTGGAAATGGCAGCAGTCAACCACACTATCTTGGCATTGGCCC 1743
