Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12785
Subject:
NM_173537.4
Aligned Length:
2866
Identities:
732
Gaps:
2117

Alignment

Query    1  ATGGCCCAGGTAGCAGTGTCCACCCTGCCTGTTGAAGAAGAGTCCTCCTCAGAGACCAGGATGGTGGTGACATT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCCCAGGTAGCAGTGTCCACCCTGCCTGTTGAAGAAGAGTCCTCCTCAGAGACCAGGATGGTGGTGACATT  74

Query   75  CCTCGTGTCTGCCCTCGAATCCATGTGTAAAGAACTGGCCGAGTCCAAGGCAGAAGTGGCCTGCATCGCAGTGT  148
            ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct   75  CCTCGTGTCTGCCCTCGAATCCATGTGTAAAGAACTGGCCAAGTCCAAGGCAGAAGTGGCCTGCATCGCAGTGT  148

Query  149  ACGAAACAGACGTGTTTGTCGTCGGAACCGAGAGAGGATGCGCTTTTGTTAATGCCAGGACGGATTTTCAGAAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACGAAACAGACGTGTTTGTCGTCGGAACCGAGAGAGGATGCGCTTTTGTTAATGCCAGGACGGATTTTCAGAAA  222

Query  223  GATTTTGCAAAATACTGCGTTGCAGAGGGACTGTGTGAGGTGAAACCTCCCTGCCCTGTGAACGGGATGCAGGT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GATTTTGCAAAATACTGCGTTGCAGAGGGACTGTGTGAGGTGAAACCTCCCTGCCCTGTGAACGGGATGCAGGT  296

Query  297  CCACTCGGGCGAAACGGAAATACTCAGGAAGGCAGTGGAGGACTATTTCTGCTTTTGTTATGGTAAAGCCTTAG  370
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCACTCAGGCGAAACGGAAATACTCAGGAAGGCAGTGGAGGACTATTTCTGCTTTTGTTATGGTAAAGCCTTAG  370

Query  371  GGACAACAGTGATGGTGCCTGTTCCCTATGAGAAGATGCTGCGAGACCAGTCGGCTGTGGTAGTGCAGGGGCTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGACAACAGTGATGGTGCCTGTTCCCTATGAGAAGATGCTGCGAGACCAGTCGGCTGTGGTAGTGCAGGGGCTT  444

Query  445  CCGGAAGGCGTTGCCTTTCAACACCCTGAGAATTACGACCTTGCAACCCTGAAATGGATTTTGGAGAACAAAGC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCGGAAGGCGTTGCCTTTCAACACCCTGAGAATTACGACCTTGCAACCCTGAAATGGATTTTGGAGAACAAAGC  518

Query  519  AGGGATTTCATTCATCATAAATAGACCCTTCCTAGGACCAGAGAGTCAGCTGGGTGGCCCTGGGATGGTAACAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGGGATTTCATTCATCATAAATAGACCCTTCCTAGGACCAGAGAGTCAGCTGGGTGGCCCTGGGATGGTAACAG  592

Query  593  ATGCGGAGAGATCCATAGTATCACCAAGTGAAAGCTGCGGCCCCATCAATGTGAAAACTGAACCCATGGAAGAT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATGCGGAGAGATCCATAGTATCACCAAGTGAAAGCTGCGGCCCCATCAATGTGAAAACTGAACCCATGGAAGAT  666

Query  667  TCTGGTGGGTACCA-------------AGATGCTTT-----------TAGAATCA-------------AGTATC  703
            |||||       ||             |||.|||.|           .|||||||             |.||| 
Sbjct  667  TCTGG-------CATTTCACTGAAAGCAGAAGCTGTCTCAGTCAAGAAAGAATCAGAAGATCCTAATTACTAT-  732

Query  704  GGCCAA--------GCGTGGTAGCTCACGCCT------------------GTAATCCCAGCAATTTGGGA--GG  749
               |||        ||..||.||| ||| |||                  |||||   ||.|||   |||  ..
Sbjct  733  ---CAATATAATATGCAAGGAAGC-CAC-CCTTCTTCCACAAGCAATGAAGTAAT---AGAAAT---GGAATTA  795

Query  750  CCGA-GGCAG----------GCGGATCACT--------------------------------------------  768
            ||.| ||.||          ||.|.||.||                                            
Sbjct  796  CCAATGGAAGATTCCACTCCGCTGGTCCCTTCAGAAGAACCAAATGAGGACCCTGAAGCCGAGGTGAAAATCGA  869

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct  870  AGGAAACACAAATTCATCCAGTGTTACAAATTCTGCAGCAGGTGTTGAAGATCTTAACATCGTTCAAGTGACTG  943

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct  944  TTCCAGATAATGAGAAGGAAAGATTATCAAGCATTGAAAAGATTAAACAGCTAAGAGAACAAGTTAATGACCTC  1017

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1018  TTTAGCCGAAAATTTGGTGAAGCAATTGGCGTGGATTTCCCTGTGAAAGTTCCCTACAGGAAGATCACATTCAA  1091

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1092  CCCTGGCTGTGTGGTGATTGATGGCATGCCCCCGGGGGTGGTATTCAAGGCCCCCGGCTATCTGGAAATCAGTT  1165

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1166  CCATGAGGAGGATCTTGGAGGCAGCTGAGTTTATCAAATTCACAGTCATCAGGCCGCTTCCAGGGCTTGAGCTC  1239

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1240  AGTAATGTGGGAAAACGCAAGATAGACCAGGAGGGCCGTGTGTTTCAAGAAAAGTGGGAGAGAGCGTATTTCTT  1313

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1314  CGTGGAAGTACAGAATATTCCAACATGTCTCATATGCAAACAAAGCATGTCTGTGTCCAAAGAATATAACCTAA  1387

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1388  GACGCCACTATCAAACCAATCACAGCAAGCATTATGACCAGTATATGGAAAGAATGCGTGACGAGAAGCTTCAC  1461

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1462  GAGCTGAAAAAAGGGCTCAGGAAGTATCTCTTAGGCTCATCAGACACCGAGTGTCCCGAGCAAAAACAAGTGTT  1535

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1536  TGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAGCCTGTAGAGGACCTAGCTGGGAACTTATGGGAGAAGT  1609

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1610  TACGTGAAAAAATCAGGTCTTTTGTGGCATATTCTATCGCAATCGATGAGATCACGGATATAAATAATACCACC  1683

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1684  CAGTTGGCCATATTCATCCGTGGTGTCGATGAGAATTTCGATGTGTCCGAAGAACTTCTGGACACGGTGCCCAT  1757

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1758  GACGGGTACAAAATCTGGCAACGAGATCTTTTCGCGTGTTGAGAAAAGCCTGAAAAACTTCTGTATCGACTGGT  1831

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1832  CGAAATTAGTAAGCGTGGCCTCCACTGGCACCCCAGCGATGGTGGATGCCAATAACGGGCTTGTCACAAAACTG  1905

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1906  AAGTCCAGGGTGGCGACGTTCTGCAAGGGTGCGGAACTGAAGTCCATCTGTTGTATAATTCATCCGGAATCACT  1979

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 1980  CTGTGCTCAGAAGTTGAAGATGGACCACGTCATGGACGTGGTAGTGAAGTCCGTGAACTGGATATGCTCCCGGG  2053

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2054  GACTGAACCACAGTGAGTTCACAACCTTGCTCTATGAGCTGGACAGCCAGTATGGTAGCCTCCTGTACTACACG  2127

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2128  GAGATTAAGTGGCTCAGTCGCGGGCTCGTGCTAAAGAGATTTTTCGAATCCTTGGAAGAAATCGACTCCTTCAT  2201

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2202  GTCATCCAGAGGGAAACCCCTGCCTCAACTGAGCTCCATAGATTGGATCCGAGACCTGGCCTTCTTGGTTGACA  2275

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2276  TGACGATGCATCTGAACGCTTTGAACATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATGTATGACCTG  2349

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2350  ATCCGGGCGTTCCTAGCAAAACTGTGCCTCTGGGAGACTCATTTGACGAGGAATAATCTGGCCCACTTTCCCAC  2423

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2424  CCTGAAATTGGCTTCCAGAAATGAAAGCGATGGCCTGAACTACATTCCCAAAATCGCGGAACTCCAGACCGAAT  2497

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2498  TCCAGAAAAGGCTGTCTGATTTCAAACTCTACGAAAGCGAACTGACTCTGTTCAGCTCCCCGTTCTCCACGAAG  2571

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2572  ATCGACAGTGTGCACGAGGAGCTCCAGATGGAGGTTATCGACCTGCAATGCAACACGGTCCTGAAGACGAAATA  2645

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2646  CGACAAGGTGGGAATACCAGAATTCTACAAGTACCTCTGGGGTAGCTACCCGAAATACAAGCACCATTGCGCAA  2719

Query  769  --------------------------------------------------------------------------  768
                                                                                      
Sbjct 2720  AGATTCTTTCCATGTTCGGGAGCACCTACATCTGCGAACAGCTGTTCTCCATTATGAAACTGAGCAAAACAAAA  2793

Query  769  ------------------------------------------------------  768
                                                                  
Sbjct 2794  TACTGCTCCCAGTTAAAGGATTCCCAGTGGGATTCTGTACTCCACATCGCAACG  2847

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