Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12944
- Subject:
- NM_144567.5
- Aligned Length:
- 1636
- Identities:
- 753
- Gaps:
- 854
Alignment
Query 1 ------------------------------------------------------------------ATGTTTCC 8
||||||||
Sbjct 1 ATGGAAGCCTGGCGCTGTGTGAGGAAGGGCTACGGCCACTGTGTGGTGGGAAGAGGCCGATACCCCATGTTTCC 74
Query 9 CCATCACTCGAGGAGTCTGGGCAGAGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTGGAACAGAC 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCATCACTCGAGGAGTCTGGGCAGAGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTGGAACAGAC 148
Query 83 ATATTTCTAGTTGTATGAGGTGGCCTGGACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTAGGCATTTT 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATATTTCTAGTTGTATGAGGTGGCCTGGACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTAGGCATTTT 222
Query 157 TCACTAAATTGGAGACCACCCTGTTTGTTTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGACCTGACAA 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCACTAAATTGGAGACCACCCTGTTTGTTTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGACCTGACAA 296
Query 231 CCTGAGCCAGACATCTTTGATTCATCTCTCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTCATCAAAAC 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTGAGCCAGACATCTTTGATTCATCTCTCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTCATCAAAAC 370
Query 305 GAAGAAAACACCAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAACGAAGATC 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAAGAAAACACCAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAACGAAGATC 444
Query 379 CTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATGTCCTATAA 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATGTCCTATAA 518
Query 453 TATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGA 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGA 592
Query 527 GTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAA 666
Query 601 GAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGT-------------------------- 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGAC 740
Query 649 ------------------------------------ACAATGCAACTTTT-----TT----------------- 664
|||.|.|||.|||| ||
Sbjct 741 AGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGG 814
Query 665 --TTTTT---------TTTTTCTTTTTT-----GAGACA-----GG----GTCTCACTCTGTC-GCCCAA---- 708
||.|| |.|||||.|.|| |||||| || ||.|.|||||..| ||||||
Sbjct 815 AATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATT 888
Query 709 -----------CTGGAGTGCA------GTGGCACAAT-------------------CATGGC-------TCACT 739
|||...|||| ||.||| ||| ||.||| | |.|
Sbjct 889 CCATATGCTGCCTGCCCTGCAATCTGCGTAGCA-AATACGCATCTGTTGTATAATCCAAGGCGAGGTGAT-ATT 960
Query 740 ACAGC---CTCAA--------CCTACTGGGC-------TCAAGTAATCCTCTC-------ATTTCGGCTTCC-- 786
| ||| |.||| .||||| ||| ||.|||..|.|.|.| ||..|.|||||.
Sbjct 961 A-AGCTGACGCAATTGGCAATGCTACT-GGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGC 1032
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1033 CCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATT 1106
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1107 GAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTA 1180
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1181 TTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAA 1254
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1255 AAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTC 1328
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1329 AAATTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCTGACACTGGAATTCCAGAAGTGA 1402
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1403 CCACCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGCAGAAAAGGAAGATGTTGCTGGG 1476
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1477 CACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTTACAGAACAAGA 1550
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1551 CTTATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTGCCTTTATTGGCAAAGTTCAGAC 1624
Query 787 -------- 786
Sbjct 1625 TTGAGCTC 1632
