Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13021
- Subject:
- NM_001330415.2
- Aligned Length:
- 2190
- Identities:
- 564
- Gaps:
- 1626
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTGCTTTTCGTGGAGCAGGTAGCATCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCTCCTGGAAATACTGATGCCACCCCAGTAACTCATGGAACTGAAAGCTCTTGGCATGAAATAGCAGCTACAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGTGCTCATCCTGAGGTGTCTGTCTTTAATACAGGTAATGCAGAGCTCTCAGAAGATATATGTAAAGAATAT 222
Query 1 ------ATGTATTCTTCATCTTGTGAAACCACAAGAAATACTACAGGCATTGAAGAATCAACTGATGGGATGAT 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAAGTAATGTATTCTTCATCTTGTGAAACCACAAGAAATACTACAGGCATTGAAGAATCAACTGATGGGATGAT 296
Query 69 TTTAGGACCAGAAGATCTGAGTTACCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAG 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTTAGGACCAGAAGATCTGAGTTACCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAG 370
Query 143 ACCTAAAAGAATGTCTGAAGAAACAATTAGAATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTG 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCTAAAAGAATGTCTGAAGAAACAATTAGAATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTG 444
Query 217 ATATCTCAAATGGATAGTGATCAGTTCATCCCAATTTGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGAC 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATATCTCAAATGGATAGTGATCAGTTCATCCCAATTTGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGAC 518
Query 291 TACAGACCCTGATCTAATTCTTGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATGAGAAGGGTGAGAAAG 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TACAGACCCTGATCTAATTCTTGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATGAGAAGGGTGAGAAAG 592
Query 365 TGAGACCAAGTCATAAGCGTTGTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCAATAGAGGAAGTGAAA 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGAGACCAAGTCATAAGCGTTGTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCAATAGAGGAAGTGAAA 666
Query 439 GGTTTGTTCAAAAGTGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAGCAACTGGTATATCAC 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGTTTGTTCAAAAGTGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAGCAACTGGTATATCAC 740
Query 513 TTTCCAGTCAGACACAGATGCACAACAGGCTTTT--ATACTTAAGAGAAGAAGT-------------------- 564
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 741 TTTCCAGTCAGACACAGATGCACAACAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAACATTTCAGGGCAAGC 814
Query 565 -------------------------------------------------------------------------- 564
Sbjct 815 CAATTATGGCAAGGATAAAAGCCATCAATACATTTTTTGCTAAGAATGGTTATCGATTAATGGATTCTAGTATC 888
Query 565 -------------------------------------------------------------------------- 564
Sbjct 889 TATAGTCACCCCATTCAAACTCAAGCACAGTATGCCTCCCCAGTCTTTATGCAGCCTGTATATAATCCTCACCA 962
Query 565 -------------------------------------------------------------------------- 564
Sbjct 963 ACAGTACTCGGTCTATAGTATTGTGCCTCAGTCTTGGTCTCCAAATCCTACACCTTACTTTGAAACACCACTGG 1036
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1037 CTCCCTTTCCCAATGGTAGTTTTGTGAATGGCTTTAATTCGCCAGGATCTTATAAAACAAATGCTGCTGCTATG 1110
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1111 AATATGGGTCGACCATTCCAAAAAAATCGTGTGAAGCCTCAGTTTAGGTCATCTGGTGGTTCAGAACACTCAAC 1184
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1185 AGAGGGCTCTGTATCCTTGGGGGATGGACAGTTGAACAGATATAGTTCAAGAAACTTTCCAGCTGAACGGCATA 1258
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1259 ACCCCACAGTAACTGGGCATCAGGAGCAAACTTACCTTCAGAAGGAGACTTCCACTTTGCAGGTGGAACAGAAT 1332
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1333 GGGGACTATGGTAGGGGCAGGAGAACTCTCTTCAGAGGTCGAAGACGACGAGAAGATGACAGGATCTCAAGACC 1406
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1407 TCATCCTTCAACAGCTGAATCAAAGGCTCCAACACCAAAGTTTGACTTATTAGCCTCAAATTTTCCACCTTTAC 1480
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1481 CTGGAAGTTCATCAAGAATGCCAGGTGAACTCGTTTTGGAGAATAGGATGTCTGATGTTGTTAAAGGTGTCTAC 1554
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1555 AAAGAAAAGGATAATGAAGAGTTGACAATTAGTTGCCCAGTGCCTGCAGATGAGCAGACAGAATGCACTTCTGC 1628
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1629 CCAGCAACTCAATATGAGTACCAGTTCTCCATGTGCTGCTGAGCTTACTGCATTAAGCACAACTCAGCAAGAAA 1702
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1703 AGGATCTAATAGAAGATTCCTCTGTTCAGAAGGATGGTCTCAATCAGACAACTATACCAGTTTCTCCTCCAAGT 1776
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1777 ACTACAAAGCCATCGAGGGCAAGTACTGCTTCACCATGTAATAATAACATAAATGCAGCTACAGCTGTGGCTCT 1850
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1851 ACAGGAACCCCGAAAGTTAAGTTATGCTGAAGTGTGCCAGAAGCCCCCTAAAGAGCCATCTTCAGTTCTTGTGC 1924
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1925 AGCCACTACGGGAACTTCGCTCCAATGTGGTGTCTCCCACCAAAAATGAAGACAATGGAGCTCCTGAGAACTCC 1998
Query 565 -------------------------------------------------------------------------- 564
Sbjct 1999 GTTGAGAAACCACATGAGAAGCCAGAAGCAAGGGCTAGTAAGGATTATTCTGGCTTCCGAGGCAATATAATCCC 2072
Query 565 -------------------------------------------------------------------------- 564
Sbjct 2073 CAGGGGAGCAGCAGGAAAAATCAGGGAACAGAGACGCCAGTTTAGCCATAGGGCTATACCTCAGGGAGTGACTC 2146
Query 565 -------------------------------------------- 564
Sbjct 2147 GACGTAATGGCAAAGAGCAATATGTGCCACCCAGATCACCAAAG 2190
