Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13369
- Subject:
- XM_006513538.3
- Aligned Length:
- 5992
- Identities:
- 934
- Gaps:
- 4925
Alignment
Query 1 ATGGCG---ACCGCAGATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGAAGGAAGAAGGGGAGCTTGAAGA 71
|||||| .||||.|||.||.||.||||||||||.||.|||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGGCGGCCGCCGCCGATCCTTCGACCCCGGCCTCTAGCGGCCTCTCGCCGAAGGAAGAAGGGGAGCTCGAAGA 74
Query 72 TGGGGAAATCAGTGACGACGATAATAACAGCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGC 145
.|||||.|||||.||||||| |.|||||||.||..|||| |.||||||||||||||||||||||||||||
Sbjct 75 CGGGGAGATCAGCGACGACG---ACAACAGCCGGAGCCGGA---GCAGCAGCAGCAGCAGCAGCGGCGGCGGGC 142
Query 146 TGTTACCCTATCCGCGGCGAAGGCCTCCTCACTCGGCCCGGGGCGGTGGATCTGGCGGA---GGCGGTGGCTCT 216
|||||||.||.||||||||..|||||||||.|.|||||||||||||||||||.||.||| |||||.|||||.
Sbjct 143 TGTTACCGTACCCGCGGCGGCGGCCTCCTCCCCCGGCCCGGGGCGGTGGATCCGGGGGAGGCGGCGGCGGCTCC 216
Query 217 TCCTCGTCATCGTCCTCTTCTCAGCAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGGCCA 290
||.||.||.|||||.||.||.|||||||||||||||||||||||||||||.||||||.||.|.|||||||||||
Sbjct 217 TCGTCCTCCTCGTCGTCCTCCCAGCAGCAGCTGAGGAATTTCTCACGCTCACGGCACCCGGCCGAGCGGGGCCA 290
Query 291 CCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACGGATGCCTTCGA 364
.||||||||||||||||||||||||||||||||||||||||||.||||.|||||..|.|..||||||||.|||.
Sbjct 291 GCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGACTCACCCGCCCCCAGGGCGGATGCCGTCGG 364
Query 365 GCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCGTTTCCGCTTT 438
|.||.|||||.||||||||.|||||||||||.||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 365 GGTCCCTGTCGGAAAGCAGCCCCCGGCCGTCCTTCTGGGAGCGGAGCCACATCGCCCTGGACCGTTTCCGCTTT 438
Query 439 CGAG---GCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGTGAGCGAGGAGGCAAGCC 509
|||| |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 439 CGAGGCAGCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGGGAGCGAGGAGGCAAGCC 512
Query 510 GGGGTGCAGACCTCCTCTGGG---------AGGAGGAGCAGGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAG 574
||||||||||||||||...|| |||||||||.||||||||.|||.|||||||.|||||||||||||
Sbjct 513 GGGGTGCAGACCTCCTGGAGGAGGAGGATCAGGAGGAGCGGGATCCGGATTCGGCAGCAGCCAGAGCTGGCGAG 586
Query 575 AGCCCTCTCCACCTCGGAAGAGCTCCAAAAGTTTTGGAAGGTCTCCATCAAGAAAACAAAATTATTCATCAAAA 648
|.|||||||||||.||.||||||||||||||.||||||||.|||||||||||||||||.|||.|.|||||.|||
Sbjct 587 AACCCTCTCCACCCCGCAAGAGCTCCAAAAGCTTTGGAAGATCTCCATCAAGAAAACAGAATCACTCATCCAAA 660
Query 649 AATGAAAACTGTGTGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAACAAATACAGTTGGAACTAGAATG 722
|..||.|||||||.||||||||||||||||||||||||||||||||||||.||||||||..||||||||||.||
Sbjct 661 AGCGAGAACTGTGCGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAGCAAATACAACTGGAACTAGAGTG 734
Query 723 CATCAATAAGGATGAAAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGCAGGAAGATCCTAAAACATTGAACT 796
|||||||||||||||||||||.||..||||||||||||||||||.||..|||||||||||.|||||||||.|.|
Sbjct 735 CATCAATAAGGATGAAAAACTGGCTCTGAGTAGCAAAGAAGAGACTGCACAGGAAGATCCGAAAACATTGCATT 808
Query 797 TCGAGGACCAAACTAGCACTGATAATGTCAGTATTACAAAGGATTCAAGTAAAGAAGTAGCTCCTGAGGAGAAA 870
|.|||||||||||.|||||.|||||||..|||||||||||.||..|||||||.|||||.||||||||||||||.
Sbjct 809 TGGAGGACCAAACAAGCACCGATAATGCTAGTATTACAAAAGACCCAAGTAAGGAAGTGGCTCCTGAGGAGAAG 882
Query 871 ACACAAGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAATTGACTTTACCAGGAGATAAGAA 944
|||||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||.||||||||
Sbjct 883 ACACAGGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAACTGACTTTACCAGGGGATAAGAA 956
Query 945 CCGTTTGAAAAAAGTTAAAGATGGAGCAAAACCACTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGG-- 1016
|||..|.||||.||..||.||||||.|||..|..||||||.||||||||..||||||.|||.||||.|||||
Sbjct 957 CCGGGTCAAAAGAGGGAAGGATGGAACAAGGCAGCTTTCCTTGAAATCCAGCACTACGGATGCTAGCCAAGGAT 1030
Query 1017 TA-----------------------------------TCCCT---------TATC------------GGGTAAA 1034
|| |.||| |||| .|||.||
Sbjct 1031 TAGAAGATAAAGAACAAAATTTAACAAGAAGACTCAGTGCCTCAGATATTGTATCTGAAAAGAAACTTGGTGAA 1104
Query 1035 G-----GAGG----GTTT----------TACTCCTATT-------------CCTGGTTTGAAATTTTCAGCG-- 1074
| |||| ||.| |.|.|||.|| .||.||..|||| |..||||.
Sbjct 1105 GAAGAAGAGGAACTGTCTGAGCTGCAGCTTCGCCTGTTGGCTCTTCAGTCGGCTAGTAAGAAA-TGGCAGCAGA 1177
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1178 AAGAGCAGCAGGTGATGAAGGAGAGCAAAGAAAAACTGACCAAGACCAAAACTGCACAGCAAAAGGCCAAAACC 1251
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1252 AGCACAAAAGCACACTCGGCCAAGAAAGTGAGCGCCACAGCTAAACAAGCACTGCGGAAGCAGCAGACAAAGGC 1325
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1326 GTGGAAGAAGCTCCAGCAGCAGAAAGAGCAGGAGAGACAGAAAGAGGAGGATCAGCGGAAACACGCTGAGGAAG 1399
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1400 AAGAGAGGAGGAAAAGAGAAGAAGAAATCAGAAAGATCCGAGACCTTTCCAACCAGGAAGAGCAGTACAATCGG 1473
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1474 TTCATGAAGTTGGTTGGTGGGAAGAGGCGAGCAAGAAGTAAATCTTCAGATCCTGACCTGAGGCGGTCCTTAGA 1547
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1548 AAAGCAGTCTGACAGTGCAGGAGGCATATATCAGTATGATAACTACGAAGAAGTTGCTATGGATACAGATAGTG 1621
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1622 AAACCAGTTCTCCAGCAGCGCCTTCACCCGTACAGCCACCGTTTTTTCCTGAGTGTTCACTGGGGTATTTTTCT 1695
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1696 TCAGCACCGTCTGTTTCTTTGCCTCCACCAGCTCAGGTTTCATCTGTGCCATCTTTGAACCAACCTTATGGGGA 1769
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1770 AGGCCTGTGCGTTTCTCTCGACCCTCTACCTCCTCTTCCACCTTTGCCACCTCTACCACCTGAAGATCCAGAAC 1843
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1844 AGCCTCCAAAGCCACCATTTGCAGATGAAGAGGAGGAGGAAGAAATGCTCCTTCGAGAAGAACTGCTTAAATCT 1917
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1918 CTAGCAAGTAAAAGAGCTTTTAAGCCAGAGGAAACATCCAGTAATAGCGACCCACCTTCACCTCCAGTTTTGAA 1991
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1992 CAATTCCCAGCCTTTGTCAAGAAGCAACCTATCAATAGTCAGTATTAATACAGTATCTCAGCCTAGGATACAGA 2065
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2066 ATCCAAAGTTCCACAGAGGACCTCGTCTTCCACGAACTGTGATCTCGCTTCCAAAACACAAATCAGTGGTTGTA 2139
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2140 ACCCTGAATGACTCAGATGACAGTGAGTCTGACGGAGAAGCTTCCAAGTCAACCAACAGTGTGTTTGGTGGATT 2213
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2214 AGAGTCCATGATCAAAGAAGCAAGGCGGACTGCAGAGCAAGCATCAAAACCCAAAGTACCTCCAAAGTCTGAGA 2287
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2288 AAGAAAACGACCCTCTGCGGACCCCTGAAGCCTTGCCTGAAGAAAAGAAGATGGAATACAGATTGTTAAAAGAA 2361
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2362 GAGATTGCCAATCGTGAGAAGCAACGTTTGATTAAATCAGATCAGCTGAAGACAAGTTCGTCGTCTCCAGCAAA 2435
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2436 CTCAGATGTGGAAATGGATGGGATTGGTAGAATAGCAATGGTTACTAAGCAAGTTGCAGATGCAGAAGCAAAGC 2509
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2510 TTAAAAAACACAAGATTCTCTTGATTAAAGATGAATCAGTTTTAAAAAATCTAGTACTGCAAGAAGCCAAGAAG 2583
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2584 AAAGAGTCTGTTCGAAATGCTGAAGCAAAAATTACAAAACTTACAGAACAGCTGCAGGCAGCAGAGAAAATCCT 2657
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2658 CAGTGCTAACAGGATGTTTCTGAAGAAGCTCCAGGAACAAATTCACAGAGTTCAACAGCGTGTTACCATTAAGA 2731
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2732 AAGCGTTGACTCTGAAGTATGGAGAAGAGCTTGCTCGGGCAAAGGCAGTGGCTAGCAAAGAACTAGGGAAACGC 2805
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2806 AAACTGGAGCAGGACCGTCTTGGACCAAACAAAATGATGAGACTGGATAATTCTCCAATATCAAGTCCAAGGAA 2879
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2880 GCATTCAGCAGAATTAATTGCTATGGAAAAAAGACGATTACAAAAGCTAGAATATGAATATGCCTTGAAAATTC 2953
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2954 AAAAGTTAAAAGAAGCCCGAGCCCTCAAAGCAAAGGAACAACAAAACCTCGTTCCCGTAGTGGAAGAGGAACCT 3027
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3028 GAGTTTTCTGTACCTCAACCCTCGCTTCATGATCTGACACAGGATAAATTAACCTTGGACACAGAAGAAAATGA 3101
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3102 TGTTGATGATGAAGTTTTGTCAGGTGCAAGCAGAGAACGAAGAAGATCCTTCCTAGAGTCCAATTCTTTCACTA 3175
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3176 AACCCAACCTTAAGCACACTGACACACCTAACAAAGAGTGTATAAACAAACTTAGTAAGAGTACTGTAGAAAAA 3249
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3250 CCAGAACTTTTTCTAGGGTTAAAAATAGGTGAACTACAAAAATTATATTCAAGAGCTGACAGTTTAAAACAGTT 3323
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3324 GATTTTAAAAACGACCACAGGCACTACAGAAAAAGTTCTGCATGGCCAGGAGATTTCTGTGGATGTGGATTTTG 3397
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3398 TTACAGCACAGAGTAAAACAACAGAAGTGAAGCCATGTCCATTTAGACCTTACCAGAGCCCTCTTCTTGTCTTT 3471
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3472 AAATCCTACAGATTTAGTCCTTACTACCGAACCAAGGAAAAGCTCCCTCTAAGCTCAGTATCTTACAGTAACAT 3545
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3546 GGTTGAGCCGGATCAGTGTTTCTGCCGCTTTGACTTAACAGGAACATGTAATGATGATGACTGTCAGTGGCAGC 3619
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3620 ATGTACAAGACTATACACTTAGCAGGAAACGGTTGTTCCAGGACATTCTCTCATACAATCTGTCTTTGATTGGC 3693
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3694 TGTTCAGAGATGAGCACTGATGAGGAAATTGCTTCTGCAGCAGAAAAATATGTTGAAAAACTTTTTGGAGTAAA 3767
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3768 CAAAGACCGGATGTCAATGGACCAGATGGCTGTTCTCCTTGTCAGCAATGTTAATGAAAGTAAAGGCCATACAC 3841
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3842 CTCCATTTACAACTTACAAAGATAAAAGAAAATGGAAGCCAAAGTTTTGTAGAAAGCCTGTATCAGAGAATAGC 3915
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3916 TGCAGTAGTGATGATGAGCAGTCTACAGGACCAATTAAGTACGCCTTCCGACCAGAGAAGCAAATAAATGTCCC 3989
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3990 AGCTCTGGACACCGTTGTCACTCCAGACGATGTTAGATATTTTACCAGTGAAACTGATGACATTGCTAACTTAG 4063
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4064 AAGCAAGTGTACTGGAAAATCCATCCCATGTACAACTTTGGCTCAAGCTTGCGTACAAGTACTTGAATCAAAAT 4137
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4138 GAGGGGCTGTGTTCAGAATCTTTGGACTCTGCTTTAAATGTACTGGCTCGAGCTCTGGAAAACAATAAAGACAA 4211
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4212 TCCAGAAATTTGGTGCCATTACCTCAGATTGTTCTCAAAAAGAGGGACCAAGGAGGAGGTGCAGGAAATGTGTG 4285
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4286 AAACAGCTGTTGAGTATGCTCCTGACTATCAAAGCTTTTGGACTTTTTTGCACCTAGAAAGCACCTTTGAAGAA 4359
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4360 AAGGATTATGTGTGTGAGAGGATGGTGGAGTTTCTGATGGGAGCGGCCAAGCGGGAAATATCAGATATTCTGTC 4433
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4434 CTTTCAGCTTTTAGAGGCTCTTTTGTTTAGAGTTCAGCTACATATATTTACTGGGAGATGCCAAAGTGCACTTG 4507
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4508 CAGTTTTACAGAATGCATTAAAATTGGCTAATGATGCAATAGTAGCTGAGTACCTTAAGACAGATGATCGGTGT 4581
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4582 CTGGCATGGCTGGCCTACATACATCTTATTGAATTCAATAGTCTCCCTTCAAAACTTTATGATCCATCTAATGC 4655
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4656 TAATCCTTCAAGAATTGTTAACACAGAACCGTTTGTAATGCCATGGCAAGCAGCTCAAGATGTCAAGACCAATC 4729
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4730 CTGACTTATTGTTAGCAGTGTTTGAAGATGCGGTGAAAGCTTGTACAGATGAGACCCTTACCAGTGGAGAAAGA 4803
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4804 ATAGAGGTCTGCCTTCCACTTTACACAAACATGATCGCTCTACACCAACTCCTAGAGAGGTATGAGGAGGCAGT 4877
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4878 GGAGCTTTGCACAAGCTTGTTGGAGTCGTGTCCCACAAACTGCCAGTTATTGGAAACCCTTGCAGCTTTGTATT 4951
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4952 TGAAAACAGATCGATATGACAAAGCCCGAAGGGTTTGGCTTACTGCATTTGAAAATAACCCTCAGAATGCGGAA 5025
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5026 ATTTTTTATCATCTCTGCAAATTTTTCATCTTGCAGGACGGAGGTGATAAGCTTCTTCCAGTTCTGAGGCAGTT 5099
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5100 CGTTGGATCCTTCTTTAAACCTGGCTTTGAGAAGTACAGTAATGTGGATTTATTTCGGTATCTCTTAAATATTC 5173
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5174 CAGGACCACTCGACATTCCAGCGTGCTTATGCAAAGGGAATTTCGATGATGATGCATTTAACAACCAAGTCCCT 5247
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5248 TATTTATGGCTGATTTACTGCCTTTGCCATCCTCTACAGTCCAGTATTAAAGAGACAGTGGAAGCGTATGAGGC 5321
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5322 GGCGTTAGGGGTGGCCATGAGGTCTGATATTGTGCAGAAGATTTGGATGGATTATCTTGTCTTTGCCAATAATA 5395
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5396 GAGCTGCTGGATCCAGAAACAAAGTCCAAGAATTCAAACTTTTTACTGACCTAGTAAATAGATGTTTGGTTACG 5469
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5470 GTGCCTGCCCGATACCCCATCCCTTTTAGCAGTGCTGATTACTGGTCCAACTATGAATTCCATAACCGGGTCAT 5543
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5544 TTTCTTTTATTTGAGCTGTGTTCCAAAGACTCAGCACTCTAAAACCCTGGAGCGGTTTTGCTCTGCTATGCCAG 5617
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5618 CAAATTCCCGACTTGCACTGAGGCTACTTCAACATGAATGGGAAGAAAGCAATGTTCAGATTCTGAAACTCCAA 5691
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5692 GCCAAGATGTTTACATATAATATCCCAACATGCCTGGCCACCTGGAAAATAGCCATTGCTGCTGAGATTGCTCT 5765
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5766 AAAGGGACAAAGAGAGGTCCACCGTTTATATCAGAGAGCCTTACAGAAGTTACCTCTTTGTGCATCACTATGGA 5839
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5840 AAGATGTAATGCTTTTTATCTTTTATTTTATCTTGATGTTTTCCTATAAATTTTCTGCATGTGCCATATCCATT 5913
Query 1075 ------------------------------------------------------------------------ 1074
Sbjct 5914 GATGTGGTAAATGCTCAAAACCTCGCTCTCTCTTACTTCTATGCTTCCCTGTCTTTTACAGCAACTCTTGTT 5985
