Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13369
- Subject:
- XM_006513539.3
- Aligned Length:
- 5989
- Identities:
- 934
- Gaps:
- 4922
Alignment
Query 1 ATGGCG---ACCGCAGATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGAAGGAAGAAGGGGAGCTTGAAGA 71
|||||| .||||.|||.||.||.||||||||||.||.|||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGGCGGCCGCCGCCGATCCTTCGACCCCGGCCTCTAGCGGCCTCTCGCCGAAGGAAGAAGGGGAGCTCGAAGA 74
Query 72 TGGGGAAATCAGTGACGACGATAATAACAGCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGC 145
.|||||.|||||.||||||| |.|||||||.||..|||| |.||||||||||||||||||||||||||||
Sbjct 75 CGGGGAGATCAGCGACGACG---ACAACAGCCGGAGCCGGA---GCAGCAGCAGCAGCAGCAGCGGCGGCGGGC 142
Query 146 TGTTACCCTATCCGCGGCGAAGGCCTCCTCACTCGGCCCGGGGCGGTGGATCTGGCGGA---GGCGGTGGCTCT 216
|||||||.||.||||||||..|||||||||.|.|||||||||||||||||||.||.||| |||||.|||||.
Sbjct 143 TGTTACCGTACCCGCGGCGGCGGCCTCCTCCCCCGGCCCGGGGCGGTGGATCCGGGGGAGGCGGCGGCGGCTCC 216
Query 217 TCCTCGTCATCGTCCTCTTCTCAGCAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGGCCA 290
||.||.||.|||||.||.||.|||||||||||||||||||||||||||||.||||||.||.|.|||||||||||
Sbjct 217 TCGTCCTCCTCGTCGTCCTCCCAGCAGCAGCTGAGGAATTTCTCACGCTCACGGCACCCGGCCGAGCGGGGCCA 290
Query 291 CCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACGGATGCCTTCGA 364
.||||||||||||||||||||||||||||||||||||||||||.||||.|||||..|.|..||||||||.|||.
Sbjct 291 GCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGACTCACCCGCCCCCAGGGCGGATGCCGTCGG 364
Query 365 GCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCGTTTCCGCTTT 438
|.||.|||||.||||||||.|||||||||||.||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 365 GGTCCCTGTCGGAAAGCAGCCCCCGGCCGTCCTTCTGGGAGCGGAGCCACATCGCCCTGGACCGTTTCCGCTTT 438
Query 439 CGAG---GCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGTGAGCGAGGAGGCAAGCC 509
|||| |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 439 CGAGGCAGCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGGGAGCGAGGAGGCAAGCC 512
Query 510 GGGGTGCAGACCTCCTCTGGG---------AGGAGGAGCAGGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAG 574
||||||||||||||||...|| |||||||||.||||||||.|||.|||||||.|||||||||||||
Sbjct 513 GGGGTGCAGACCTCCTGGAGGAGGAGGATCAGGAGGAGCGGGATCCGGATTCGGCAGCAGCCAGAGCTGGCGAG 586
Query 575 AGCCCTCTCCACCTCGGAAGAGCTCCAAAAGTTTTGGAAGGTCTCCATCAAGAAAACAAAATTATTCATCAAAA 648
|.|||||||||||.||.||||||||||||||.||||||||.|||||||||||||||||.|||.|.|||||.|||
Sbjct 587 AACCCTCTCCACCCCGCAAGAGCTCCAAAAGCTTTGGAAGATCTCCATCAAGAAAACAGAATCACTCATCCAAA 660
Query 649 AATGAAAACTGTGTGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAACAAATACAGTTGGAACTAGAATG 722
|..||.|||||||.||||||||||||||||||||||||||||||||||||.||||||||..||||||||||.||
Sbjct 661 AGCGAGAACTGTGCGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAGCAAATACAACTGGAACTAGAGTG 734
Query 723 CATCAATAAGGATGAAAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGCAGGAAGATCCTAAAACATTGAACT 796
|||||||||||||||||||||.||..||||||||||||||||||.||..|||||||||||.|||||||||.|.|
Sbjct 735 CATCAATAAGGATGAAAAACTGGCTCTGAGTAGCAAAGAAGAGACTGCACAGGAAGATCCGAAAACATTGCATT 808
Query 797 TCGAGGACCAAACTAGCACTGATAATGTCAGTATTACAAAGGATTCAAGTAAAGAAGTAGCTCCTGAGGAGAAA 870
|.|||||||||||.|||||.|||||||..|||||||||||.||..|||||||.|||||.||||||||||||||.
Sbjct 809 TGGAGGACCAAACAAGCACCGATAATGCTAGTATTACAAAAGACCCAAGTAAGGAAGTGGCTCCTGAGGAGAAG 882
Query 871 ACACAAGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAATTGACTTTACCAGGAGATAAGAA 944
|||||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||.||||||||
Sbjct 883 ACACAGGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAACTGACTTTACCAGGGGATAAGAA 956
Query 945 CCGTTTGAAAAAAGTTAAAGATGGAGCAAAACCACTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGG-- 1016
|||..|.||||.||..||.||||||.|||..|..||||||.||||||||..||||||.|||.||||.|||||
Sbjct 957 CCGGGTCAAAAGAGGGAAGGATGGAACAAGGCAGCTTTCCTTGAAATCCAGCACTACGGATGCTAGCCAAGGAT 1030
Query 1017 TA-----------------------------------TCCCT---------TATC------------GGGTAAA 1034
|| |.||| |||| .|||.||
Sbjct 1031 TAGAAGATAAAGAACAAAATTTAACAAGAAGACTCAGTGCCTCAGATATTGTATCTGAAAAGAAACTTGGTGAA 1104
Query 1035 G-----GAGG----GTTT----------TACTCCTATT-------------CCTGGTTTGAAATTTTCAGCG-- 1074
| |||| ||.| |.|.|||.|| .||.||..|||| |..||||.
Sbjct 1105 GAAGAAGAGGAACTGTCTGAGCTGCAGCTTCGCCTGTTGGCTCTTCAGTCGGCTAGTAAGAAA-TGGCAGCAGA 1177
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1178 AAGAGCAGCAGGTGATGAAGGAGAGCAAAGAAAAACTGACCAAGACCAAAACTGCACAGCAAAAGGCCAAAACC 1251
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1252 AGCACAAAAGCACACTCGGCCAAGAAAGTGAGCGCCACAGCTAAACAAGCACTGCGGAAGCAGCAGACAAAGGC 1325
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1326 GTGGAAGAAGCTCCAGCAGCAGAAAGAGCAGGAGAGACAGAAAGAGGAGGATCAGCGGAAACACGCTGAGGAAG 1399
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1400 AAGAGAGGAGGAAAAGAGAAGAAGAAATCAGAAAGATCCGAGACCTTTCCAACCAGGAAGAGCAGTACAATCGG 1473
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1474 TTCATGAAGTTGGTTGGTGGGAAGAGGCGAGCAAGAAGTAAATCTTCAGATCCTGACCTGAGGCGGTCCTTAGA 1547
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1548 AAAGCAGTCTGACAGTGCAGGAGGCATATATCAGTATGATAACTACGAAGAAGTTGCTATGGATACAGATAGTG 1621
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1622 AAACCAGTTCTCCAGCGCCTTCACCCGTACAGCCACCGTTTTTTCCTGAGTGTTCACTGGGGTATTTTTCTTCA 1695
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1696 GCACCGTCTGTTTCTTTGCCTCCACCAGCTCAGGTTTCATCTGTGCCATCTTTGAACCAACCTTATGGGGAAGG 1769
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1770 CCTGTGCGTTTCTCTCGACCCTCTACCTCCTCTTCCACCTTTGCCACCTCTACCACCTGAAGATCCAGAACAGC 1843
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1844 CTCCAAAGCCACCATTTGCAGATGAAGAGGAGGAGGAAGAAATGCTCCTTCGAGAAGAACTGCTTAAATCTCTA 1917
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1918 GCAAGTAAAAGAGCTTTTAAGCCAGAGGAAACATCCAGTAATAGCGACCCACCTTCACCTCCAGTTTTGAACAA 1991
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1992 TTCCCAGCCTTTGTCAAGAAGCAACCTATCAATAGTCAGTATTAATACAGTATCTCAGCCTAGGATACAGAATC 2065
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2066 CAAAGTTCCACAGAGGACCTCGTCTTCCACGAACTGTGATCTCGCTTCCAAAACACAAATCAGTGGTTGTAACC 2139
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2140 CTGAATGACTCAGATGACAGTGAGTCTGACGGAGAAGCTTCCAAGTCAACCAACAGTGTGTTTGGTGGATTAGA 2213
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2214 GTCCATGATCAAAGAAGCAAGGCGGACTGCAGAGCAAGCATCAAAACCCAAAGTACCTCCAAAGTCTGAGAAAG 2287
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2288 AAAACGACCCTCTGCGGACCCCTGAAGCCTTGCCTGAAGAAAAGAAGATGGAATACAGATTGTTAAAAGAAGAG 2361
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2362 ATTGCCAATCGTGAGAAGCAACGTTTGATTAAATCAGATCAGCTGAAGACAAGTTCGTCGTCTCCAGCAAACTC 2435
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2436 AGATGTGGAAATGGATGGGATTGGTAGAATAGCAATGGTTACTAAGCAAGTTGCAGATGCAGAAGCAAAGCTTA 2509
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2510 AAAAACACAAGATTCTCTTGATTAAAGATGAATCAGTTTTAAAAAATCTAGTACTGCAAGAAGCCAAGAAGAAA 2583
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2584 GAGTCTGTTCGAAATGCTGAAGCAAAAATTACAAAACTTACAGAACAGCTGCAGGCAGCAGAGAAAATCCTCAG 2657
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2658 TGCTAACAGGATGTTTCTGAAGAAGCTCCAGGAACAAATTCACAGAGTTCAACAGCGTGTTACCATTAAGAAAG 2731
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2732 CGTTGACTCTGAAGTATGGAGAAGAGCTTGCTCGGGCAAAGGCAGTGGCTAGCAAAGAACTAGGGAAACGCAAA 2805
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2806 CTGGAGCAGGACCGTCTTGGACCAAACAAAATGATGAGACTGGATAATTCTCCAATATCAAGTCCAAGGAAGCA 2879
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2880 TTCAGCAGAATTAATTGCTATGGAAAAAAGACGATTACAAAAGCTAGAATATGAATATGCCTTGAAAATTCAAA 2953
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2954 AGTTAAAAGAAGCCCGAGCCCTCAAAGCAAAGGAACAACAAAACCTCGTTCCCGTAGTGGAAGAGGAACCTGAG 3027
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3028 TTTTCTGTACCTCAACCCTCGCTTCATGATCTGACACAGGATAAATTAACCTTGGACACAGAAGAAAATGATGT 3101
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3102 TGATGATGAAGTTTTGTCAGGTGCAAGCAGAGAACGAAGAAGATCCTTCCTAGAGTCCAATTCTTTCACTAAAC 3175
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3176 CCAACCTTAAGCACACTGACACACCTAACAAAGAGTGTATAAACAAACTTAGTAAGAGTACTGTAGAAAAACCA 3249
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3250 GAACTTTTTCTAGGGTTAAAAATAGGTGAACTACAAAAATTATATTCAAGAGCTGACAGTTTAAAACAGTTGAT 3323
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3324 TTTAAAAACGACCACAGGCACTACAGAAAAAGTTCTGCATGGCCAGGAGATTTCTGTGGATGTGGATTTTGTTA 3397
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3398 CAGCACAGAGTAAAACAACAGAAGTGAAGCCATGTCCATTTAGACCTTACCAGAGCCCTCTTCTTGTCTTTAAA 3471
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3472 TCCTACAGATTTAGTCCTTACTACCGAACCAAGGAAAAGCTCCCTCTAAGCTCAGTATCTTACAGTAACATGGT 3545
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3546 TGAGCCGGATCAGTGTTTCTGCCGCTTTGACTTAACAGGAACATGTAATGATGATGACTGTCAGTGGCAGCATG 3619
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3620 TACAAGACTATACACTTAGCAGGAAACGGTTGTTCCAGGACATTCTCTCATACAATCTGTCTTTGATTGGCTGT 3693
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3694 TCAGAGATGAGCACTGATGAGGAAATTGCTTCTGCAGCAGAAAAATATGTTGAAAAACTTTTTGGAGTAAACAA 3767
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3768 AGACCGGATGTCAATGGACCAGATGGCTGTTCTCCTTGTCAGCAATGTTAATGAAAGTAAAGGCCATACACCTC 3841
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3842 CATTTACAACTTACAAAGATAAAAGAAAATGGAAGCCAAAGTTTTGTAGAAAGCCTGTATCAGAGAATAGCTGC 3915
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3916 AGTAGTGATGATGAGCAGTCTACAGGACCAATTAAGTACGCCTTCCGACCAGAGAAGCAAATAAATGTCCCAGC 3989
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3990 TCTGGACACCGTTGTCACTCCAGACGATGTTAGATATTTTACCAGTGAAACTGATGACATTGCTAACTTAGAAG 4063
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4064 CAAGTGTACTGGAAAATCCATCCCATGTACAACTTTGGCTCAAGCTTGCGTACAAGTACTTGAATCAAAATGAG 4137
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4138 GGGCTGTGTTCAGAATCTTTGGACTCTGCTTTAAATGTACTGGCTCGAGCTCTGGAAAACAATAAAGACAATCC 4211
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4212 AGAAATTTGGTGCCATTACCTCAGATTGTTCTCAAAAAGAGGGACCAAGGAGGAGGTGCAGGAAATGTGTGAAA 4285
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4286 CAGCTGTTGAGTATGCTCCTGACTATCAAAGCTTTTGGACTTTTTTGCACCTAGAAAGCACCTTTGAAGAAAAG 4359
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4360 GATTATGTGTGTGAGAGGATGGTGGAGTTTCTGATGGGAGCGGCCAAGCGGGAAATATCAGATATTCTGTCCTT 4433
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4434 TCAGCTTTTAGAGGCTCTTTTGTTTAGAGTTCAGCTACATATATTTACTGGGAGATGCCAAAGTGCACTTGCAG 4507
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4508 TTTTACAGAATGCATTAAAATTGGCTAATGATGCAATAGTAGCTGAGTACCTTAAGACAGATGATCGGTGTCTG 4581
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4582 GCATGGCTGGCCTACATACATCTTATTGAATTCAATAGTCTCCCTTCAAAACTTTATGATCCATCTAATGCTAA 4655
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4656 TCCTTCAAGAATTGTTAACACAGAACCGTTTGTAATGCCATGGCAAGCAGCTCAAGATGTCAAGACCAATCCTG 4729
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4730 ACTTATTGTTAGCAGTGTTTGAAGATGCGGTGAAAGCTTGTACAGATGAGACCCTTACCAGTGGAGAAAGAATA 4803
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4804 GAGGTCTGCCTTCCACTTTACACAAACATGATCGCTCTACACCAACTCCTAGAGAGGTATGAGGAGGCAGTGGA 4877
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4878 GCTTTGCACAAGCTTGTTGGAGTCGTGTCCCACAAACTGCCAGTTATTGGAAACCCTTGCAGCTTTGTATTTGA 4951
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4952 AAACAGATCGATATGACAAAGCCCGAAGGGTTTGGCTTACTGCATTTGAAAATAACCCTCAGAATGCGGAAATT 5025
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5026 TTTTATCATCTCTGCAAATTTTTCATCTTGCAGGACGGAGGTGATAAGCTTCTTCCAGTTCTGAGGCAGTTCGT 5099
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5100 TGGATCCTTCTTTAAACCTGGCTTTGAGAAGTACAGTAATGTGGATTTATTTCGGTATCTCTTAAATATTCCAG 5173
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5174 GACCACTCGACATTCCAGCGTGCTTATGCAAAGGGAATTTCGATGATGATGCATTTAACAACCAAGTCCCTTAT 5247
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5248 TTATGGCTGATTTACTGCCTTTGCCATCCTCTACAGTCCAGTATTAAAGAGACAGTGGAAGCGTATGAGGCGGC 5321
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5322 GTTAGGGGTGGCCATGAGGTCTGATATTGTGCAGAAGATTTGGATGGATTATCTTGTCTTTGCCAATAATAGAG 5395
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5396 CTGCTGGATCCAGAAACAAAGTCCAAGAATTCAAACTTTTTACTGACCTAGTAAATAGATGTTTGGTTACGGTG 5469
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5470 CCTGCCCGATACCCCATCCCTTTTAGCAGTGCTGATTACTGGTCCAACTATGAATTCCATAACCGGGTCATTTT 5543
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5544 CTTTTATTTGAGCTGTGTTCCAAAGACTCAGCACTCTAAAACCCTGGAGCGGTTTTGCTCTGCTATGCCAGCAA 5617
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5618 ATTCCCGACTTGCACTGAGGCTACTTCAACATGAATGGGAAGAAAGCAATGTTCAGATTCTGAAACTCCAAGCC 5691
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5692 AAGATGTTTACATATAATATCCCAACATGCCTGGCCACCTGGAAAATAGCCATTGCTGCTGAGATTGCTCTAAA 5765
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5766 GGGACAAAGAGAGGTCCACCGTTTATATCAGAGAGCCTTACAGAAGTTACCTCTTTGTGCATCACTATGGAAAG 5839
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5840 ATGTAATGCTTTTTATCTTTTATTTTATCTTGATGTTTTCCTATAAATTTTCTGCATGTGCCATATCCATTGAT 5913
Query 1075 --------------------------------------------------------------------- 1074
Sbjct 5914 GTGGTAAATGCTCAAAACCTCGCTCTCTCTTACTTCTATGCTTCCCTGTCTTTTACAGCAACTCTTGTT 5982
