Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13729
- Subject:
- NR_003572.2
- Aligned Length:
- 5812
- Identities:
- 210
- Gaps:
- 5570
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAGGCGGGGCCGGGCCGGGGCGGGGTCTCGGGCAGGGGCGGGGAGCTTACCGACCTCCCGCCCCCGCTGCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTTTCTGGCCCTGCCAGTGTCTCCGCCGGTTGAAAGCGCGTGTCTGCGTCGGGTTCTGTTGGAGTGCGTTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGCCGTGGGTCCGCGCTGCTTCCACCCAACTTCCTGTTAGAGTTTCTCTCCTGTCACAATGGCATGGTCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCACTGCGACCTCTGCTTCCTGGGTTCAAGGATTCTCCTGCCTCAGTCTCCCAAGTAGCTGGGATTACAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCACCCGAGGACGGGTCACCATGGCTTTGGAGCACCTGGTAGTGTGGCATGTCCACAGTGAAGACCAGAGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTTGTCCTTAAGACTGACCTGGGGAGACGTGGCTGCAGGCCATTGAGGAAGACGGCACCGAAAGCGAAGGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCCTGCTCCTCCTAAAGCCGAAGCCAAAGTGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCCACACGCAAAAAAGAAGATCCGCATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTTCGGAGGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCAGATATCCTCGGAAGAGCACCCCCAGGAGAAACAAGCTTGGCCACTATGCTATCAAGTTTCCGCTGACCAC 666
Query 1 ---------ATGAAGAAGACAGAAGACAACAACGCACTTGTGTTCACTGTGAATGTTAAAGCCAACAAGCACCA 65
..||||||||.||||||.|.||||...|||||||||...|||.||||||||||||||||||||||
Sbjct 667 TGAGTGGGCCGGAAGAAGATAGAAGAAAGCAACATGCTTGTGTTCTTCGTGGATGTTAAAGCCAACAAGCACCA 740
Query 66 ---------------GAAGAAGCTCTATGACACTGATGTGGCCAAGGTCAACACCCTGATTCGGCCTGATGGAG 124
|||||||.|||||||||.|||||||||||||||||.||||||||||...||||||..||
Sbjct 741 GATCAGACAGGCTGTGAAGAAGGTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTTTCCTGATAAAG 814
Query 125 AGAAGGA-----ACATGTTCGACTGGCTCCTGATTACAATGCTTTGGATGTTGCCAACAAAATAGGGATCATCT 193
||||..| |.||||||||||||||||||||||..|.||||||||||||| |||||||||.||||||||||
Sbjct 815 AGAACAAGGCATATATGTTCGACTGGCTCCTGATTATGAAGCTTTGGATGTTG-CAACAAAATTGGGATCATCT 887
Query 194 CAACTGAGTCCAGTTGGCTAATTCTAAATATATGTATATCTTTTCACCAT------------------------ 243
.||||||||||||.|||||||.||||||||.||||.||||||||||||||
Sbjct 888 AAACTGAGTCCAGCTGGCTAACTCTAAATACATGTGTATCTTTTCACCATAAAAGAATAATGTTTTTCATAAGA 961
Query 244 -------------------------------------------------------------------------- 243
Sbjct 962 GTGACAACTTAATTAGAATCAAATCTATAAGCTTTAAGATTTTACATTTCTGTAAGTATAATATTAGCTTATTT 1035
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1036 GACTAGAACTCAAGCAGAATAGGAATTTATGTTTGTTTTATATTCAAGTGATAACTTTGAAGACATAGTTTTAT 1109
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1110 TACACCAAAAATTTTATATTAATCTCATTTAAGTAAGTTTTATCCAAATCATGTTAACTTAAAAAACATTTGAT 1183
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1184 CAGTTCCTATATTTCTAGGAGTTTGGTGAATATTTATTTATAAATGGTTATTTTTTTCCAAGCCAAGTTAGAAT 1257
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1258 AGAGCACTTTTATAGGATTTTATAAATGAATTTTGCAGTGCTATCCGGAGTTAAGAAAATATCACATATACATT 1331
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1332 ACATACAGTAATAGATATACAAACACAAATAGAGATTTCATAGCTTTCATCCTGAAATTTCAGCCATGAATCAG 1405
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1406 GCATAAATATTCTGATGGTTAATTTTAGACATCTACTTGATTGGATTAAGAAACATACATAGCTGGTCAAACAA 1479
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1480 TTTCAGCCATGAAACAGGCATAAATATTCTGATGGTTAATTTTAGACATCTACTTGACTGGATTGAGAGACACA 1553
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1554 CGTAGCTGGTGAAACACAATTTCTGGGCATATCTGTGAAGGTGTTTCTGGAAGACACTGAGATAACCCTGACCC 1627
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1628 AGTGTGGATGGGCACTGATATGGTTTGCCTGTGTCCCCACCCAGATCTCATCTTGAATTGTAGTTCCTATAATC 1701
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1702 CGTACATGTCGTGGGAGGGACCCAGTGGGAGGTGATTGAATCATGGTGGTTGTTACTGCCATTCTGTTTTCATG 1775
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1776 GCAGTGAGTGAGTTCTCATGATCCAATGGTTTCATAAGGGGCTGTTCCCCTTTGGCTCAGCACTTCTTCTTGTT 1849
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1850 GCTGCCATGTGAAGAAGGACGTCTTTGTTTCCCCTTCTGCCATGATTGTGAGGCCTCTGCAGCCACGTGGAACT 1923
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1924 GTCAGCCCATTTAACCTCTTTGTTCTTTATAAATTGCTCAGACTCAGGTATTTCTTCACAGCTGTATAAAAATG 1997
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1998 GATGAATACAGGCACCATCCAATTGGTTGAGAGCCCAGATAGAATAACAAGGAAGAGGAAAGGTGAATTATCTC 2071
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2072 CTGAAATTGAAACATCCTTCTTCTCCTGCCCTTGACATCAGAATCAGTGTCTCAGAGCTTTGGCCTCAGAATCA 2145
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2146 GAGTTACACCATTGGCTTCCCTGATTCTGAGTCCTTTATATCTGGAGTGAGTCATGCTGCCAGCTTTCCTGGTT 2219
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2220 CTCCAACTTGGAGACAGGCTATTGTGTAACTTCTCAGCCTCCATAATTATGTGAACCAATTCCCCTAATGAGTC 2293
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2294 TTCTCTCATCTATCTACATATATCCTATTGATTCTGCCTTTCTGGAGAACCCTGACTAATGTTATTACAATAAT 2367
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2368 ACAAAATTCACTAGTTTATATAGAAGACTTGGTTTTTGTCTTTGCCCCATTTTGTATTTGTATTATAACTGTGT 2441
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2442 ATCTGGAAAATGGAACAAGTTTTTATCTTCTTCATATGAGGGCCAAAGCTTTTTTCTCACCAATATTTTTGGAG 2515
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2516 ATTTTTAAGATTTTCTTTTGTTTGGACATACAATCTTATGGAGGCTGAGAAATAAAATTTTTTCTATTTTATTT 2589
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2590 TTCAGCCCCAGATGTTTGCTTTTGCAGATTCTTGAGCACATTGAGAGCATGGAGAGCACTCCAAGGCATGGAGT 2663
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2664 GGGGTGCCTAAAGTTTCAGTGATTACAGGGAGTTGAGAGACTCAACTGGGAAAGGAAAAGTCTAAAAGGAGGCA 2737
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2738 ATTTGGAAGATAAAAATTTTCTCAAAGGAGCGATTAAATTTCTAAATAATTCTTAGTAAAATCATGTAAACAGG 2811
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2812 AAAGGAAATAGAATTAGTTCCATATTGGTGGAACACATAGCAGAGGTTTGAGAAGGGAGAATTTAGTCAACTGA 2885
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2886 GAAGTTCTCATGAAAGGAGCAAGTTCAAGATCACAGAGACACCTTGAAACAAAAAGCCAGGAATAACTTCCAAC 2959
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2960 CCAAGAGGAGAACAGAGAGGCCTCAAAACCAAAGCTAGGATAAGAAACTTGTAGCCCAAGAGTTATCTTCCAGA 3033
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3034 CAAAGAAGCCTGAGATTCCAACGCAGCTTCAGAGAGTGCTCACTCAAAATGTTACTGAAACTGAAGGCTTTTTA 3107
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3108 ATGACTTAGCCATGCCTGCAAAAGGCATTCCCTAAGGTGGCACAGAAGACGGAGCCCCCATATCCAAAGATAGC 3181
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3182 CAAGGAGAAAGAAAGACCCCTGTTGCCAGAGCCAGTGGGCAAAGGCAACAGAAAAGGAGACAAGGGTCCTAATG 3255
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3256 GGATGAGATCCTTTCGGATTTAGGCTTTTATACAAACTCCTGAGAACTGGCGGGTTGACAGCCATAAATGGGGT 3329
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3330 ACCAAACTTTCTACTCATTGGATTACAAGTTCTCAGGCATCCAGAATGATGAACAAAATGACAATTTCTAGGGC 3403
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3404 TTCTGTGGGAGAGTATGGAAAGGTCTTTTTGAACCTTTTAATGCTGTCAACGGAAGAATGATGAGGTTCATAAA 3477
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3478 TTTGGAAAGGAGACATTTCTTCATTTTTATGTTTATTTTTATTTTTTTTGAGACAGAGTTTCACTCTTGTTGCC 3551
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3552 CAGGCTGGAGTGCAATGGCGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCT 3625
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3626 CAGCCTCCTGATTAGCTGGGATTACAGATGCCCACCACCACACCTGGCTAATTTTTTGCAGTTTTAGTAGAGAC 3699
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3700 AGGGTTTCATCATGTTGGCCAGGCTGGTCTGAAACTCATGAGCTCAGGTGATCCACTTGCCTTAGCCTCCCAAA 3773
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3774 GTGCTGGGATTGCAGGCATGAGCCACCCAACCAGTGAGAGATTTATTTCCTATAAAGGGTTGTAGCCTGCAGGG 3847
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3848 TTGTCCTTCTGACAGGCTGGGAAGCATAGCCTCCAGCCAGAAGCCAGAAACAGACTCTTCAAGGAGGAGGTAAA 3921
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3922 GGAAATAGCAATTTATGCTGACTGGAATGGCCAAATACATTTATTTAATAAGCTCCAGGAGGAGTCATGAATAT 3995
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3996 TTATGGAAGGAGAAATGCATGCATGCACAATTGAGTTTCTGGCTTCTTCATGGGTCCCATGTACAAAAAATGGC 4069
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4070 AGTGTTAGCATGATCCCAGGGTGGAGTTTTCAGCCCTCTGACATTAAAAGGTGAAGCAGAGGACATGAAAACTC 4143
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4144 GCTCTGTGCATCCTCTGTACGCTGGCCAGAACCTCTCTGTTGTGGGTGGTCTCTTATCAGGCAAGAAAGGAGAG 4217
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4218 GTTGATATCGGTAGTGGAGGCTTTGAAAGGGCTGGTTTCTGTTAAATCCTTAGGGAAGAAAGCCTCATCATGGT 4291
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4292 TAGCAAAGGAGTGGGTTTAACGATGTGTATGTTAACCCCATCATCCCATCCTAGCAAAGCTGAGAACTCAGTTT 4365
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4366 TGAAAGTTACTCTGTGGTCCCCTCAGCCAAGAGTGGTTCTGTTCAGTCAGTTGGGAGCTTATAATTTAATTTTT 4439
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4440 GTTTATCAATGCTAATGCGAAAGAGTACGCTGTCTTCATGGCAGCTGAATTTGCAAGAAACTCCTTGGATGGGG 4513
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4514 TTAATGGCAGCTGTATTTTTCTGGGAGCTCTGCTTTAATTGGACAAAGTAAGTTGTGGTAAGATTTCTTCTTTT 4587
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4588 ATCTTCAGTATCTCAAATGTTTTCATTTAAATAATCTTTATAACAACTTTTGATGTCTGAGTGGATTCCCATAC 4661
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4662 AGTCATCTATTGTAAGACTTTCTGATTCCGTTTTTTTCCTTTGGTCATTATGAATAGGGCTTATGTAAATAATT 4735
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4736 GCATGGTAGCTTTTGATTGGAAATAACATCAAAGTAGTTGTCAAAATACTTAGGAATGTTATTTTTGGATTGTA 4809
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4810 AGGTGAGACTTGTTTAGCTTTGGAAAAAAATGCCCAACTTGTAATAGGGGAGGAAAAATAATTTTCTGTTTTCG 4883
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4884 GAATTCTTAGATGGGATGCTCTGTAAAAACTGACAGATTAAAATGAGAAAAACAGAAAAGTTGAAAAACACGTA 4957
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4958 TACCTTATGGTTACATGGGAGATATTCAGGGAAAAATGAGTAAATCTCCAACAGGTGGCTTTCAATTCAAGCAT 5031
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5032 AAATACTGTCTTCAACTTAAAGAAAGAAGATTTGAGGTGCAGTATTGGGGAGTTAACCAGCAAAAGCACATTAG 5105
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5106 ACAAGGGTAAGGTTCATTATACAGACTTAAGTCCATGCATTCTCCATTGATAAGACTCTTTAGTGATTTAGTTA 5179
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5180 TCCTTCTCTTCTTGGTGTCGAGAGAGGTAGCTTTTAAATGGTGATTTCCTTTATAGATGTAAATTTTCCTTACA 5253
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5254 CAAGTGTAACTTCTCTGTTTTCACAACTTCCTTTGTTAGCATTTTTTTTTTTCAAAATAATTAGCTTGGAATAA 5327
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5328 TTCTTAAGCCAAAGGGACATATTTTGGGGTTGCATATTCTGGTTTCCTACCATTATATTTTGGGGTGGCATATT 5401
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5402 TTGGTCTTATACACTGTGTTCCACCGGCAATGAAAAGAGTTCTTGTTTTTCCTCCAGCAATTTGTCATTTGTTA 5475
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5476 AAGAGTTTAGCAGTTCTAAGAGATATAGACCAGCTGTGCTATCTTTTTGTGGTTTTCAGTTCTCTAGTATGTTG 5549
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5550 AGCATCTTTTTGTAAGTGTACTTGCCATCTGTAGATCTTCTTTGGTGAGGCGTCTGTTCAGATCTGTGTGCATT 5623
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5624 TTTAATTGGGCTGTTTAACTTATTGTTTAGTTTTAACAATTTTTTATGTATTTTGAATACAAATTCTCAGATCT 5697
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5698 GTATTTTGCAAATATTTTCTTCAATATGTGGCTTGTCTTTTGGTTCTCTTAACAAGGTCTCTTCCAGAGTATAA 5771
Query 244 ---------------------------------------- 243
Sbjct 5772 ACTGTAAATATTAAGAAAAAAAAAAAAAAAAAAAAAAAAA 5811
