Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13729
- Subject:
- NR_029406.1
- Aligned Length:
- 2257
- Identities:
- 215
- Gaps:
- 2015
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATATCTCGTCATGGACTGTGCCCCGCTCGAGCCTCTCCACATGCAGCCGGAAGGAAAGTGGAGGGAGCTGCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTCCGTAGCCGGGGTGCCCACCCCAACCAGGCTGCCTCTGCCACCCAAGACAGAGGTTCTCTGATAATAATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGGGGCTTGTTTCCAGAGACCACACCTGAAGCTGCCAACTCCCCGGAGGGAAGGTCCTGATTAATGGCCGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAATTTCTCCTTAAGGCCCTGAAACTGCCTACTCAGAACCAAGCCAGTTTTTCCTGCCTGTCCTGTTTGGGCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGAGGAGGCAGCTAGAAACCCATTATGCAGGGGATGGGGACCAAACCAATGCACAACTCCTACGTACTGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGGTCTTACGTTTCCCTAAGTTTCTGCCGACTAAACTGTGCACACGTTCTCAGGACCTCCTGAAGCTGCGTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGGCGCTGATCAAAGAACACAACCAAGAGTTTGGCCTTTTCTTCAGCACTGGGAATTGTGATCCAAAGCTTTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGATGAGGTACAAAGTTGGAGAAACAAAACGCAAACTAAGCAACAATGAAACAGAACAGAGTGAATCTGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGCTCAAGAGAGGACGTAGCTGCCCCCACCCCGCATCCCTGGGCTCGGGTTTGCCTTGCTGACCTCTGCTGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCTGGTGCCGCACAGAGAAACTGAGGAGAAACCACATCAGTCTCCTTCAGCCTCAGCTTCACATCTGTGGGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCAACCCTTTCAGAAGCTGTATAATGTGGGAAAGCTTTCCTCTCAGGAAAATGCACACATCCAACTTTGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGATGCCCTTGGGGGTGCTTCAAGGATCCTAGATAATAACCCCCTTTCCCGAACATCCAAGAACCTAAGTTTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTTTTTTTTTGAGAAAGTCTCGCTCTCTCTCCCATTCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCACCTCCCAGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCACCTGCCACCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATCGTCTTGATCTCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACCTTGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCTGGTCCAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCCAACTTTTAGATCTAGAGTGATGTCAGCATGACATTGATTTCCTGAGGCCCAGGGGTGAAGGAGCTGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAGCAGAGGGGTGAAGGAAGTCAGCTACAGACAGCAGCAGCTGATGCACAGGCCTCCCAGCGCCTGAAGTCAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCGGAATTGGGAAGTGCTCAGAAGCTTACAAAGCTGCCTCGAGATGGCACCAAAAGCGAAGGAAGCTCCTGCTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCCTAAAGCCGAAGCCAAAGCGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCGCAGCCACACG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAAAAAAGAAGATCCGCATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTCCGGAGGCAGCCCAGATAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTCGGAAGAGTACCCCCACGAGAAACAAGCTTGGCCACTATGCTATCATCAAGTTTCCGCTGGCCACTGAGTC 1628
Query 1 ----ATGAAGAAGACAGAAGACAACAACGCACTTGTGTTCACTGTGAATGTTAAAGCCAACAAGCACCA----- 65
.|||||||||.||||||.||||||.|.|||||||||||||||.||||||||||||||||||||||
Sbjct 1629 GGCCGTGAAGAAGATAGAAGAAAACAACACGCTTGTGTTCACTGTGGATGTTAAAGCCAACAAGCACCAGATCA 1702
Query 66 ----------GAAGAAGCTCTATGACACTGATGTGGCCAAGGTCAACACCCTGATTCGGCCTGATGGAG---AG 126
|||||||.|||||||||.|||||||||||||||||.||||||||||.|.||||||..|| ||
Sbjct 1703 GACAGGCTGTGAAGAAGGTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTGTCCTGATAAAGAGAAG 1776
Query 127 AAGGAACATGTTCGACTGGCTCCTGATTACAATGCTTTGGATGTTGCCAACAAAATAGGGATCATCTCAACTGA 200
||||.|.||||||||||.|||||||||||..|||||||.||||||| .||||||||.|||||||.||.||||||
Sbjct 1777 AAGGCATATGTTCGACTTGCTCCTGATTATGATGCTTTCGATGTTG-TAACAAAATTGGGATCACCTAAACTGA 1849
Query 201 GTCCAGTTGGCTAATTCTAAATATATGTATATCTTTTCACCAT------------------------------- 243
||||||.|||||||.|||||||||||||.||||||||||.|||
Sbjct 1850 GTCCAGCTGGCTAACTCTAAATATATGTGTATCTTTTCAGCATAAAAAAATAATGTTTTTCATAAGAATGACAA 1923
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1924 CTTAATTAGAATCAAATCTATAAGCTTTAAGATTTTATGTTTCTAGTAAGTATAATATTAGCTTATTTGACTAG 1997
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1998 AACTCAAGCAGAATAGGAATTTATGCTTGTTTTATATTCAATAATAATTTTGAAGATACAGTTGTTTTATTACA 2071
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2072 CCAAAAATACTATATTAATCTTATTTAACTAAGTTTTATCCAAATCATGTTAACTTAAGAAACATTTGATCAGT 2145
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2146 TCCTATATTTCTAGGAGTTTGGTGAATATTTATTTATAAATGCTTATTTTTTTCCAAGCCAAGTTAGAATAGAG 2219
Query 244 ------------------------------------- 243
Sbjct 2220 CACTTTTAGAGGATTTCATAAATGAATTTTGCAATGC 2256