Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13766
- Subject:
- NR_135754.2
- Aligned Length:
- 5622
- Identities:
- 220
- Gaps:
- 5381
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGAAATGGACCAATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTCCAGAAAACCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCAGTACCTCACTGTGGACC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTATACGTGGATAACAACATTCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAGAAACCATTTAGATTGATGGGCCTCCCCAAATCTAAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTGATCATCTAGCCAGATTCCCTTTTGAACACACATACC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTGTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAATGTAGATTGTAATGAAATACACTTCCTGTTTTTTAAAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AATTTCCTGATAAGATTTTTTTTATATGAGAAGAATTTGAGGAATATTTGAAGCTTTACAAGATCTGATTTTTT 1776
Query 1 ---------------------------ATG-----GGGGGCGGAGTGAGCGGTGAACACAC--TGAACAGAA-- 38
||| |||||.|.| ||||||| |||| |.||
Sbjct 1777 TCTTTCTCAATATAAAGTTTCCATACAATGAGAAAGGGGGAGAA----------AACACACATTGAA-ATAAGA 1839
Query 39 --------------TCTGA---------GAT----TTAATAAGCC--------AAA--------TCAACAATGT 69
|.||| ||| ||.||| | ||| ||| .||||
Sbjct 1840 CCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATA---CTGACTTTGAAATATTTTTGTCA--CATGT 1908
Query 70 GGGAAG--TTC-----------------GTTTTGTTTT-TTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAG 123
|.||| ||| |||||.|||| ||.||.|||||||||||||||||||||||.|||||
Sbjct 1909 -GAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCCCAG 1981
Query 124 GCTGCAGTGCAATGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAG 197
||||.||||||.||||..||||||||||||||||||||||||||||.|.|||||||||||||||||||||||||
Sbjct 1982 GCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAG 2055
Query 198 CCTTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTT------------- 258
|||.||.||||||||||||.|||||||||||||||||.|||||||||||||||||||||||
Sbjct 2056 CCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGG 2129
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2130 GTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGCT 2203
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2204 GGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACAGGATGATTCAAAGTACAGCCCGTG 2277
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2278 CACATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTCGTTTCTTGTATACTTAGCTTACTG 2351
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2352 CCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAAC 2425
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2426 AGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAA 2499
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2500 AGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAAATG 2573
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2574 TTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAGAAAAATTAT 2647
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2648 TTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATTAGCTGCCCTGACTTTATAATGCTA 2721
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2722 CGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGATCTTTTTACAGTCACAACACCTGCT 2795
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2796 GCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTG 2869
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2870 TTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAACATTTCAAAGGCTTATAGTAAAATA 2943
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2944 GGAACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAATTGAAGTTTAACATAACCTCTACAT 3017
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3018 GTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCTTCAGGCCTAAGTGACTGCTACCTA 3091
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3092 TGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGGAATGGAG 3165
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3166 CTATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGATACATTAGTTTTACCTTGTTTGAA 3239
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3240 ATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGAACTACGGTGTGTTAAACAACAGCA 3313
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3314 GTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAG 3387
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3388 AAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTATGCTGGATTTATCGATGTCATTCTT 3461
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3462 AATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTACATGCTATATATTTGAATTGTGTC 3535
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3536 CAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCTTGAGCAACAGTTACACTAGGTAGA 3609
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3610 AAAGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAAGTATCATCTCTGTTCAGGTAAGTT 3683
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3684 TACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCCT 3757
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3758 ATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTTCTTCAGTATGTCCAATTGTTATCA 3831
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3832 TACCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTTCAGTTAATACATGTTTTGAGCACA 3905
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3906 TTCTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGCTTGGGTGGAGGATCCACTCTGGCT 3979
Query 259 -------------------------------------------------------------------------- 258
Sbjct 3980 AACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGAAAAGTGAGGTGTACATTAAACATC 4053
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4054 TTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCTCACTTCT 4127
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4128 GTTTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGGCTT 4201
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4202 ATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAATTT 4275
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4276 TTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAGAAATTCTAATCTTTGCTATAAAGT 4349
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4350 ACTTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAGATGATTTATGAACATGGATTTCTA 4423
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4424 ACTGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTCATTTCACAGACTCATAAACACACT 4497
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4498 CTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTTATTATGCCTTCATTTTTGTGGTTT 4571
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4572 TCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAACTCAGTGAATATCTTGCCTTTTCT 4645
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4646 TCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTATGTCTATCTAAAAATCAAGTCTCGG 4719
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4720 CAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTTGAG 4793
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4794 ACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGCGCA 4867
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4868 CCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGAAGAGGTTGCATTGAGC 4941
Query 259 -------------------------------------------------------------------------- 258
Sbjct 4942 TGAGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAATCATTCAAGTTTC 5015
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5016 ACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATCTGAAAGTGATGCCGGTGTCTCTAG 5089
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5090 GAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTGAAG 5163
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5164 TATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAA 5237
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5238 GGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACTTTTTTCCACTCA 5311
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5312 AGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTAAAT 5385
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5386 GATCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAAATTATGGCAACATTCATTTGGAGT 5459
Query 259 -------------------------------------------------------------------------- 258
Sbjct 5460 GTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTATAGAATAATTGAGCTT 5533
Query 259 ------------------------------------------------------------------------ 258
Sbjct 5534 GAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAATCTCGATACGAA 5605
