Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14172
Subject:
NM_025545.4
Aligned Length:
1054
Identities:
659
Gaps:
320

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCGGAAGCAGTAGCTAAGATGCGAGTGTGCTGGTTGGTGAGACAGGACAGCAGGCACCAGCGAATCAAACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCCCCATTTGGAAGCTGTTGTGATTGGTCGAAGCCCAGAGACCAAGATCACAGATAAGAAATGTTCCCGACAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAAGTACAGCAGATGGGGGTCAACCCCACCAGCATT  222

Query    1  ------------------------------------------------------------ATGGTGAATGAACT  14
                                                                        ||||||||||.|||
Sbjct  223  GACTCGGGCGTCATCGGGAAGGACCAAGAGAAGAAGCTGCTGCCTGGTCAGGTTCTCCACATGGTGAATGGACT  296

Query   15  TTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGAT  88
            |||||||||.||.||||||||||||||||.||||.|||.||||..|||   ||||||.||||||||||||||.|
Sbjct  297  TTATCCATACATCGTAGAGTTTGAGGAAGTGGCAGAGAGCCCTAACCT---AACACAGAGGAAGAGAAAGAGGT  367

Query   89  CAGGCAACAGTGATTCTATAGAAAGG-GATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAG  161
            |||   ||.|||     ||||..||| |||        ||||||||||.|||||||||||||||.|||||||||
Sbjct  368  CAG---ACTGTG-----ATAGTGAGGAGAT--------GGAAGCTGAGTCTGGGACAGGGCTGGCACCTGGGAG  425

Query  162  CAACTCTGGCCAATGCTCTGTG-CCCCTAAAGAAGGGAAAAG-ATGCACCTATCAAAAAGGAATCCCTGGGCCA  233
            ||.|.|..||||.||||||||| ||||| ||||| |||.||| |||.|.|.|.||||||||||||.||||||||
Sbjct  426  CAGCCCCAGCCAGTGCTCTGTGTCCCCT-AAGAA-GGACAAGAATGGAGCCACCAAAAAGGAATCACTGGGCCA  497

Query  234  CTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA  307
            |||||||||||||||||||||.||||||.|.||||||||||||||||||||||||||.||.|||||||||||||
Sbjct  498  CTGGAGTCAAGGCTTGAAGATGTCTATGAAAGACCCCAAAATGCAGGTTTACAAAGACGACCAGGTGGTGGTGA  571

Query  308  TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCT  381
            |.||||||||||||||.|||||||||.||||.||||||||||||||||||.|||||||||||||||||||||.|
Sbjct  572  TTAAGGATAAATACCCCAAGGCCCGTCACCACTGGCTGGTCTTACCGTGGGCCTCCATTTCCAGTCTGAAGGTT  645

Query  382  GTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGG  455
            |||.||||.||||||||||||||.||.||.|||||||||.||||||||||.||||||||.|.||||||||||||
Sbjct  646  GTGACCAGTGAACACCTTGAACTTCTCAAACATATGCACGCTGTGGGGGAGAAGGTGATAGCAGATTTTGCTGG  719

Query  456  GTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCA  529
            .|||||||||||.||||||||||||||||||||.||||||||.||.||||||||.|||||||||||||||||||
Sbjct  720  ATCCAGCAAACTGCGCTTCCGATTGGGCTACCATGCCATTCCCAGCATGAGCCACGTACATCTTCATGTGATCA  793

Query  530  GCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAA  603
            |||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||.||.|||
Sbjct  794  GCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAGCATTGGAATTCTTTTAATACAGAATACTTTCTGGAA  867

Query  604  TCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGA--TGCCTGAGCTCTTG  675
            |||||||||||||||.|||||||.||.||.||.||.|||||.|||||...||||||.|  ||  ||||||||||
Sbjct  868  TCACAAGCTGTGATCAAGATGGTTCAGGAAGCCGGCAGAGTGACTGTTAAAGATGGCACTTG--TGAGCTCTTG  939

Query  676  AAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAA  749
            ||||||||.||.|||||.||||||||.||||||||||||||||||||.||.|||||||||||.||.||||||||
Sbjct  940  AAGCTGCCTCTCCGTTGCCATGAGTGTCAGCAGCTGCTGCCTTCCATCCCGCAGCTGAAAGAGCACCTCAGGAA  1013

Query  750  GCACTGGACACAG-----  762
            |||||||     |     
Sbjct 1014  GCACTGG-----GGCGGG  1026