Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14172
- Subject:
- NM_025545.4
- Aligned Length:
- 1054
- Identities:
- 659
- Gaps:
- 320
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCGGAAGCAGTAGCTAAGATGCGAGTGTGCTGGTTGGTGAGACAGGACAGCAGGCACCAGCGAATCAAACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCCCATTTGGAAGCTGTTGTGATTGGTCGAAGCCCAGAGACCAAGATCACAGATAAGAAATGTTCCCGACAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAAGTACAGCAGATGGGGGTCAACCCCACCAGCATT 222
Query 1 ------------------------------------------------------------ATGGTGAATGAACT 14
||||||||||.|||
Sbjct 223 GACTCGGGCGTCATCGGGAAGGACCAAGAGAAGAAGCTGCTGCCTGGTCAGGTTCTCCACATGGTGAATGGACT 296
Query 15 TTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGAT 88
|||||||||.||.||||||||||||||||.||||.|||.||||..||| ||||||.||||||||||||||.|
Sbjct 297 TTATCCATACATCGTAGAGTTTGAGGAAGTGGCAGAGAGCCCTAACCT---AACACAGAGGAAGAGAAAGAGGT 367
Query 89 CAGGCAACAGTGATTCTATAGAAAGG-GATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAG 161
||| ||.||| ||||..||| ||| ||||||||||.|||||||||||||||.|||||||||
Sbjct 368 CAG---ACTGTG-----ATAGTGAGGAGAT--------GGAAGCTGAGTCTGGGACAGGGCTGGCACCTGGGAG 425
Query 162 CAACTCTGGCCAATGCTCTGTG-CCCCTAAAGAAGGGAAAAG-ATGCACCTATCAAAAAGGAATCCCTGGGCCA 233
||.|.|..||||.||||||||| ||||| ||||| |||.||| |||.|.|.|.||||||||||||.||||||||
Sbjct 426 CAGCCCCAGCCAGTGCTCTGTGTCCCCT-AAGAA-GGACAAGAATGGAGCCACCAAAAAGGAATCACTGGGCCA 497
Query 234 CTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA 307
|||||||||||||||||||||.||||||.|.||||||||||||||||||||||||||.||.|||||||||||||
Sbjct 498 CTGGAGTCAAGGCTTGAAGATGTCTATGAAAGACCCCAAAATGCAGGTTTACAAAGACGACCAGGTGGTGGTGA 571
Query 308 TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCT 381
|.||||||||||||||.|||||||||.||||.||||||||||||||||||.|||||||||||||||||||||.|
Sbjct 572 TTAAGGATAAATACCCCAAGGCCCGTCACCACTGGCTGGTCTTACCGTGGGCCTCCATTTCCAGTCTGAAGGTT 645
Query 382 GTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGG 455
|||.||||.||||||||||||||.||.||.|||||||||.||||||||||.||||||||.|.||||||||||||
Sbjct 646 GTGACCAGTGAACACCTTGAACTTCTCAAACATATGCACGCTGTGGGGGAGAAGGTGATAGCAGATTTTGCTGG 719
Query 456 GTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCA 529
.|||||||||||.||||||||||||||||||||.||||||||.||.||||||||.|||||||||||||||||||
Sbjct 720 ATCCAGCAAACTGCGCTTCCGATTGGGCTACCATGCCATTCCCAGCATGAGCCACGTACATCTTCATGTGATCA 793
Query 530 GCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAA 603
|||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||.||.|||
Sbjct 794 GCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAGCATTGGAATTCTTTTAATACAGAATACTTTCTGGAA 867
Query 604 TCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGA--TGCCTGAGCTCTTG 675
|||||||||||||||.|||||||.||.||.||.||.|||||.|||||...||||||.| || ||||||||||
Sbjct 868 TCACAAGCTGTGATCAAGATGGTTCAGGAAGCCGGCAGAGTGACTGTTAAAGATGGCACTTG--TGAGCTCTTG 939
Query 676 AAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAA 749
||||||||.||.|||||.||||||||.||||||||||||||||||||.||.|||||||||||.||.||||||||
Sbjct 940 AAGCTGCCTCTCCGTTGCCATGAGTGTCAGCAGCTGCTGCCTTCCATCCCGCAGCTGAAAGAGCACCTCAGGAA 1013
Query 750 GCACTGGACACAG----- 762
||||||| |
Sbjct 1014 GCACTGG-----GGCGGG 1026