Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14206
- Subject:
- NM_001267827.1
- Aligned Length:
- 2441
- Identities:
- 399
- Gaps:
- 2028
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTCCTACCGACCACAATCCAGCCCCAAACTGCAAGAAAGAGCCAGCTGCCCCGGGGGAATTCCTGCCTGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCTCCATATCGCCAGCCCTCAGCTGCTCAGGGTACAGCCGCTTGTGAGAACCGAGCCACAGTCCTGCTTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAAGTGACTTATGCCAACCTCCTGCTCAGGGGTTTGTACAGAGACCACTGCCAGCCCTCCAGGTGGTCCCTGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGAGAGTCCCAGCCCCCAAGGCTCCAGATGAACAGGGCTCCATGTTGACCCCTTTGTCTGCCTCTGACCCGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCAGTAACATCTCTTTCATCCAGTTCAGCACATCCATTTATTTCCAACTTGCATACAAGACATACTGAGAAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAAAAAAATCGTTAAAAGTAAAGACACGTTCTGGACGGGTATCTCGACCTCCCAAATATAAAGCTAAAGATTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGTTCATAAAAACAGAGGATCTGGCGGATGGTCATCTGTCAGATTCTGATGATTACTCAGAACTCTGTGTGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAAGATGAAGATCAGAGGGAGAGGCACGCACTCTTTGACTTATCGAGCTGCTCCCTGAGGCCCAAAAGCTTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTGTCAGACTTGTGAAAAGTCATATATAGGGAAGGGGGGACTGGCCCGACATTTTAAACTTAACCCAGGCCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCCAGTTGGACCCCGAGATGGTGCTGTCTGAGAAAGCCAGTGGAAGCACCCTCCGGGGGTGCACGGAGGAAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GACGCTCAGCCTGACCTCCCTGGGGCTGTCCATGCCAGCGGATCCATGTGAGGGAGGGGCCCGCTCCTGCTTGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGACAGAGTCAGCACGCGGTGGCCTGCAGAATGGTCAGTCTGTAGACGTTGAAGAGACATTGCCATCTGAACCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAAAATGGAGCTCTTTTGCGATCAGAGAGATACCAAGGACCTAGAAGACGCGCATGCTCAGAGACCCTTGCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCCCGCACAGCTGTCCTCCAGCAGAGAAGAGCTGCTCAGCTACCTGGTGGCCCTGCTGCGGCAGGGGAGCAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGGCGTCGCCAAGCAAAGCCAGGCTCAAGGAGTTCCTCCAGCAGTGTGACCGGGAGGATCTGGTGGAATTGGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGCCTCAGCTGGCTCAGGTTGTGACCGTGTATGAGTTTCTTCTGATGAAGGTTGAAAAAGATCATCTAGCAAA 1184
Query 1 ----------------------------------------------ATGGTTAAG-AAATGTGCCAAGATTACC 27
||||||||| ||||||||||||||||||
Sbjct 1185 GCCTTTTTTCCCAGCTATATATAAGGAATTTGAAGAGTTGCATAAAATGGTTAAGAAAATGTGCCAAGATTACC 1258
Query 28 TCAGTAGTTCTGGTCTGTGTTCCCAGGAGACCCTGGAAATAAACAATGATAAGGTTGCTGAGTCATTAGGAATC 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCAGTAGTTCTGGTCTGTGTTCCCAGGAGACCCTGGAAATAAACAATGATAAGGTTGCTGAGTCATTAGGAATC 1332
Query 102 ACAGAATTCCTACGGAAGAAAGAAATACACCCAGACAACCTTGGACCCAAGCACCTCAGCCGAGACATGGATGG 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACAGAATTCCTACGGAAGAAAGAAATACACCCAGACAACCTTGGACCCAAGCACCTCAGCCGAGACATGGATGG 1406
Query 176 GGAGCAGCTAGAGGGAGCTAGCAGCGAGAAGAGGGAACGTGAGGCTGCGGAGGAGGGACTGGCCTCAGTGAAAA 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGAGCAGCTAGAGGGAGCTAGCAGCGAGAAGAGGGAACGTGAGGCTGCGGAGGAGGGACTGGCCTCAGTGAAAA 1480
Query 250 GGCCCAGAAGAGAAGCCCTGTCCAACGATACCACTGAATCTCTTGCTGCCAACAGCAGAGGCCGGGAGAAGCCC 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGCCCAGAAGAGAAGCCCTGTCCAACGATACCACTGAATCTCTTGCTGCCAACAGCAGAGGCCGGGAGAAGCCC 1554
Query 324 AGGCCCTTGCATGCTTTGGCCGCTG--------------GTACAAT---AGTGTC---------TCAGGAGGAG 371
||||||||||||||||||||||||| ||| ||| |.|||| ||.|.||.|.
Sbjct 1555 AGGCCCTTGCATGCTTTGGCCGCTGGTTTTTCCCCTCCAGTA-AATGTGACTGTCTCTCCCCGTTCTGAAGAAA 1627
Query 372 GACATTGTCACAGTGACTGAT-------GCAGAGGG-GCGTG---CCTGCGATGGGCCCGC------------- 421
|.||| |||..|||.|.| |||..||| ||||| |..|| ||||||||
Sbjct 1628 GCCAT----ACAACGACGGTTTCTGGTGGCAATGGGAGCGTGTTCCAGGC---GGGCCCGCAGCTTCAGGCACT 1694
Query 422 -------------------------------------------------------------------------- 421
Sbjct 1695 GGCTAACTTAGAAGCCAGGAGGGGGTCTATAGGTGCTGCTCTCTCATCCCGGGATGTCAGTGGGCTGCCTGTTT 1768
Query 422 -------------------------------------------------------------------------- 421
Sbjct 1769 ATGCTCAGTCAGGAGAGCCTAGGAGGCTGACCCAGGCACAGGTGGCAGCGTTTCCTGGAGAGAATGCTTTGGAA 1842
Query 422 -------------------------------------------------------------------------- 421
Sbjct 1843 CACTCTTCAGACCAGGACACCTGGGACAGCCTGAGGAGCCCGGGTTTCTGCAGCCCTTTGTCATCTGGTGGTGG 1916
Query 422 -------------------------------------------------------------------------- 421
Sbjct 1917 AGCAGAGTCCCTGCCGCCTGGGGGGCCTGGACATGCAGAGGCAGGACACCTCGGCAAGGTTTGTGACTTCCACC 1990
Query 422 -------------------------------------------------------------------------- 421
Sbjct 1991 TGAACCACCAGCAGCCCAGCCCCACCAGCGTCCTGCCTACAGAGGTGGCAGCCCCTCCGCTTGAGAAAATTTTG 2064
Query 422 -------------------------------------------------------------------------- 421
Sbjct 2065 TCTGTGGATAGCGTGGCAGTGGACTGTGCCTACAGGACTGTGCCCAAGCCAGGGCCTCAGCCTGGCCCACATGG 2138
Query 422 -------------------------------------------------------------------------- 421
Sbjct 2139 ATCACTATTGACTGAAGGGTGTCTCAGAAGCCTTTCGGGGGACTTGAACCGGTTCCCCTGTGGGATGGAGGTGC 2212
Query 422 -------------------------------------------------------------------------- 421
Sbjct 2213 ACTCTGGCCAGAGAGAACTGGAGAGCGTGGTTGCTGTCGGCGAAGCCATGGCTTTTGAAATTTCCAATGGGAGC 2286
Query 422 -------------------------------------------------------------------------- 421
Sbjct 2287 CATGAGTTACTGTCTCAGGGACAGAAGCAGATTTTTATTCAGACTTCCGATGGGCTTATCTTGTCCCCTCCAGG 2360
Query 422 ------------------------------------------------------------------------- 421
Sbjct 2361 TACAATAGTGTCTCAGGAGGAGGACATTGTCACAGTGACTGATGCAGAGGGGCGTGCCTGCGGATGGGCCCGC 2433
