Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14534
- Subject:
- XM_011519930.3
- Aligned Length:
- 2969
- Identities:
- 1632
- Gaps:
- 993
Alignment
Query 1 ATGCCGGCCGTGTCCAAGGGCGATGGGATGCGGGGGCTCGCGGTGTTCATCTCCGACATCCGGAACTGTAAGAG 74
||||||||||||||||||||.||.|||||||||||.||.|||||.||||||||.||.|||||.||||||||.||
Sbjct 1 ATGCCGGCCGTGTCCAAGGGGGACGGGATGCGGGGCCTGGCGGTCTTCATCTCGGATATCCGCAACTGTAAAAG 74
Query 75 CAAAGAGGCGGAAATTAAGAGAATCAACAAGGAACTGGCCAACATCCGCTCCAAGTTCAAAGGAGACAAAGC-C 147
.|||||.||.|||||.||.||.||.||||||||||||||.||.|||.|.||.||.||.|||||.|||||.|| |
Sbjct 75 TAAAGAAGCAGAAATAAAAAGGATAAACAAGGAACTGGCAAATATCAGATCAAAATTTAAAGGTGACAAGGCTC 148
Query 148 TTGGATGGCTACAGTAAGAAAAAATATGTGTGTAAACTGCTTTTCATCTTCCTGCTTGGCCATGACATTGACTT 221
|| ||||||||.|||||.|||||.||.||.||.||..||||.||||||||.||.|||||.||||||||||||||
Sbjct 149 TT-GATGGCTATAGTAAAAAAAAGTACGTCTGCAAGTTGCTCTTCATCTTTCTCCTTGGTCATGACATTGACTT 221
Query 222 TGGGCACATGGAGGCTGTGAATCTGTTGAGTTCCAATAAATACACAGAGAAGCAAATAGGTTACCTGTTCATTT 295
|||.|||||||||||||||||.|||.|||||||.||.|.||||||.||.|||||.||.||.|||||.|||||.|
Sbjct 222 TGGACACATGGAGGCTGTGAACCTGCTGAGTTCAAACAGATACACGGAAAAGCAGATCGGCTACCTTTTCATCT 295
Query 296 CTGTGCTGGTGAACTCGAACTCGGAGCTGATCCGCCTCATCAACAACGCCATCAAGAATGACCTGGCCAGCCGC 369
|||||.||||||||||.|||...||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 296 CTGTGTTGGTGAACTCAAACAGTGAGCTGATCCGCCTGATCAACAACGCCATCAAGAATGACCTGGCCAGCCGC 369
Query 370 AACCCCACCTTCATGTGCCTGGCCCTGCACTGCATCGCCAACGTGGGCAGCCGGGAGATGGGCGAGGCCTTTGC 443
|||||||||||||||.||||||||||||||||||||||||.||||||||||||||||||||.|||||||||.||
Sbjct 370 AACCCCACCTTCATGGGCCTGGCCCTGCACTGCATCGCCAGCGTGGGCAGCCGGGAGATGGCCGAGGCCTTCGC 443
Query 444 CGCTGACATCCCCCGCATCCTGGTGGCCGGGGACAGCATGGACAGTGTCAAGCAGAGTGCGGCCCTGTGCCTCC 517
||..||.|||||.....||||.||.|||||.||||..||||||||.||.||||||||.||||||||||||.|.|
Sbjct 444 CGGGGAGATCCCTAAGGTCCTCGTAGCCGGAGACACTATGGACAGCGTGAAGCAGAGCGCGGCCCTGTGCTTGC 517
Query 518 TTCGACTGTACAAGGCCTCGCCTGACCTGGTGCCCATGGGCGAGTGGACGGCGCGTGTGGTACACCTGCTCAAT 591
|.||.|||||||.|.|.||.||.||.||.||.|||||||||||.|||||..|.||.|||||.||||||||||||
Sbjct 518 TGCGCCTGTACAGGACGTCCCCCGATCTTGTCCCCATGGGCGACTGGACATCCCGAGTGGTGCACCTGCTCAAT 591
Query 592 GACCAGCACATGGGTGTGGTCACGGCCGCCGTCAGCCTCATCACCTGTCTCT-GCA-AGAAGAACCCAGATGAC 663
|||||||||.||||||||||.||.||.|||...||.||.|||||| .||.| ||| |||||||||||||.||.
Sbjct 592 GACCAGCACTTGGGTGTGGTAACTGCAGCCACAAGTCTGATCACC--ACTTTAGCACAGAAGAACCCAGAAGAG 663
Query 664 TTCAAGACGTGCGTCTCTCTGGCTGTGTCGCGCCTGAGCCGGATCGTCTCCTCTGCCTCCACCGACCTCCAGGA 737
||.||.||.|.|||.|||||||||||.||..|.||.|||.|.|||||..|.|||||.|||||.||.||||||||
Sbjct 664 TTTAAAACCTCCGTGTCTCTGGCTGTCTCTAGGCTAAGCAGAATCGTGACGTCTGCATCCACAGATCTCCAGGA 737
Query 738 CTACACCTACTACTTCGTCCCAGCACCCTGGCTCTCGGTGAAGCTCCTGCGGCTGCTGCAGTGCTACCCGCTTC 811
.|||||.|||||.||.|||||.||.||||||||.||.||.||.||.|||.|.|||||||||||||||||.|..|
Sbjct 738 TTACACTTACTATTTTGTCCCGGCTCCCTGGCTGTCTGTCAAACTGCTGAGACTGCTGCAGTGCTACCCACCCC 811
Query 812 CAGAGGATGCGGCTGTGAAGGGGCGGCTGGTGGAATGTCTGGAGACTGTGCTCAACAAGGCCCAGGAGCCCCCC 885
||||.||..|.||.|||...||.||.|||...||.||.||||||||..|.||.|||||.|||||.||.||.|||
Sbjct 812 CAGAAGACCCTGCAGTGCGAGGCCGCCTGACTGAGTGCCTGGAGACCATCCTGAACAAAGCCCAAGAACCGCCC 885
Query 886 AAATCCAAGAAGGTGCAGCATTCCAACGCCAAGAACGCCATCCTCTTCGAGACCATCAGCCTCATCATCCACTA 959
||.||.||||||||.|||||.||||||||.|||||.|||.|.|||||||||.||||||||.|.|||||.|||.|
Sbjct 886 AAGTCGAAGAAGGTCCAGCACTCCAACGCGAAGAATGCCGTGCTCTTCGAGGCCATCAGCTTAATCATTCACCA 959
Query 960 TGACAGTGAGCCCAACCTCCTGGTTCGGGCCTGCAACCAGCTGGGCCAGTTCCTGCAGCACCGGGAGACCAACC 1033
||||||||||||.|||||.||.||.||.||||||||||||.||||||||||.|||||||||||.||||||||||
Sbjct 960 TGACAGTGAGCCGAACCTGCTCGTCCGTGCCTGCAACCAGTTGGGCCAGTTTCTGCAGCACCGCGAGACCAACC 1033
Query 1034 TGCGCTACCTGGCCCTGGAGAGCATGTGCACGCTGGCCAGCTCCGAGTTCTCCCATGAAGCCGTCAAGACGCAC 1107
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||||||||||||
Sbjct 1034 TGCGCTACCTGGCCCTGGAGAGCATGTGCACGCTGGCCAGCTCTGAGTTCTCCCATGAGGCTGTCAAGACGCAC 1107
Query 1108 ATTGACACCGTCATCAATGCCCTCAAGACGGAGCGGGACGTCAGCGTGCGGCAGCGGGCGGCTGACCTCCTCTA 1181
||.||.||.||||||||.|||||.|||||.|||||||||||.|||||||||||||||||.|..|||||||||||
Sbjct 1108 ATCGAGACGGTCATCAACGCCCTGAAGACTGAGCGGGACGTGAGCGTGCGGCAGCGGGCCGTGGACCTCCTCTA 1181
Query 1182 CGCCATGTGTGACCGGAGCAATGCCAAGCAGATCGTGTCGGAGATGCTGCGGTACCTGGAGACGGCAGACTACG 1255
|||||||||.|||||.|||||.|||...|||||||||.|.|||||||||.|.||.||||||||.||.||||||.
Sbjct 1182 CGCCATGTGCGACCGCAGCAACGCCCCACAGATCGTGGCCGAGATGCTGAGCTATCTGGAGACAGCTGACTACT 1255
Query 1256 CCATCCGCGAGGAGATCGTCCTGAAGGTGGCCATCCTGGCCGAGAAGTACGCCGTGGACTACAGCTGGTACGTG 1329
|||||||.||.|||||.||.||||||||.|||||||||||.|||||||||||.||||||||||.||||||.|||
Sbjct 1256 CCATCCGAGAAGAGATTGTGCTGAAGGTCGCCATCCTGGCTGAGAAGTACGCGGTGGACTACACCTGGTATGTG 1329
Query 1330 GACACCATCCTCAACCTCATCCGCATTGCGGGCGACTACGTGAGTGAGGAGGTGTGGTACCGTGTGCTACAGAT 1403
||.||||||.|.|||.|.|||||.|||||.||.||.|||||||||||.||||||||||||||.||..|.|||||
Sbjct 1330 GATACCATCTTGAACTTGATCCGAATTGCTGGTGATTACGTGAGTGAAGAGGTGTGGTACCGAGTCATTCAGAT 1403
Query 1404 CGTCACCAACCGTGATGACGTCCAGGGCTATGCCGCCAAGACCGTCTTTGAGGCGCTCCAGGCCCCTGCCTGTC 1477
|||||.||||||.||.|||||.||||||||.||.||||||||.||.||.|||||.||.|||||.||.||.||.|
Sbjct 1404 CGTCATCAACCGGGACGACGTGCAGGGCTACGCGGCCAAGACTGTGTTCGAGGCTCTTCAGGCTCCCGCGTGCC 1477
Query 1478 ACGAGAACATGGTGAAGGTTGGCGGCTACATCCTTGGGGAGTTTGGGAACCTGATTGCTGGGGACCCCCGCTCC 1551
||||||||.||||.||.||.||||||||||||||.|||||||||||.|||.||||.|||||.|||||..|.|||
Sbjct 1478 ACGAGAACCTGGTCAAAGTGGGCGGCTACATCCTGGGGGAGTTTGGAAACTTGATAGCTGGAGACCCGAGATCC 1551
Query 1552 AGCCCCCCAGTGCAGTTCTCCCTGCTCCACTCCAAGTTCCATCTGTGCAGCGTGGCCACGCGGGCGCTGCTGCT 1625
|||||.|...|.||||||..||||||.||||||||||||||.|||||||||||..||||.||.||||||||.||
Sbjct 1552 AGCCCGCTGATCCAGTTCCACCTGCTGCACTCCAAGTTCCACCTGTGCAGCGTCCCCACCCGCGCGCTGCTCCT 1625
Query 1626 GTCCACCTACATCAAGTTCATCAACCTCTTCCCCGAGACCAAGGCCACCATCCAGNGGNGNTCTGCGGGCCGGC 1699
|||||||||||||||||||.|.|||||||||||.|||...|||.||||||||||| |..|..|||||...||.|
Sbjct 1626 GTCCACCTACATCAAGTTCGTGAACCTCTTCCCGGAGGTGAAGCCCACCATCCAG-GACGTGCTGCGCAGCGAC 1698
Query 1700 TCCCAGCTGCGCAATGCTGACGTGGAGCTGCAGCAGCGAGCCGTGGAGTACCTCACCCTCAGCTCAGTGGCCAG 1773
..||||||..|.||.||.||||||||||||||||||||.||.|||||||||||....||||||.|.||||||||
Sbjct 1699 AGCCAGCTCAGGAACGCAGACGTGGAGCTGCAGCAGCGTGCTGTGGAGTACCTGCGGCTCAGCACCGTGGCCAG 1772
Query 1774 CACCGACGTCCTGGCCACGGTGCTGGAGGAGATGCCGCCCTTCCCCGAGCGCGAGTCGTCCATCCTGGCCAAGC 1847
|||||||.|.|||||.||.|||||||||||||||||.||.|||||.|||||.|||||.||||||.||||.||||
Sbjct 1773 CACCGACATTCTGGCGACCGTGCTGGAGGAGATGCCCCCATTCCCGGAGCGGGAGTCCTCCATCTTGGCAAAGC 1846
Query 1848 TGAA-ACGCAAGAAGGGGCCAGGGGCCGGCAGCGCCCTG---GACGATGGCCGGAGGGACCCCAGCAGCAACGA 1917
|.|| |.| ||||||||.|| ||||.|..|| ||| |.|||| ||
Sbjct 1847 TCAAGAAG-AAGAAGGGCCC---------CAGCACGGTGACAGAC-----CTGGAG----------------GA 1889
Query 1918 CATCAACGGGGGCATGGAGCCCACCCCCAGCACTGTGTCGACGCCCTCGCCCTCCGCCGACC-----TCCTGGG 1986
||.|||..|||.|| ||| ||||.|||| .||.| |||||.|
Sbjct 1890 CACCAAGCGGGACA-GGA----------------GTGTGGACG--------------TGAACGGGGGTCCTGAG 1932
Query 1987 GCTGCGGGCAGCCCCTCCCCCGGCAGCAC-----CCCCGGCTTCTGCAGGAGCAGGGAACCTT-CTGGTGGA-- 2052
.||| ||||.|.|||.|| ||..||.|||||.|| ||| |||.||| ||.|||||
Sbjct 1933 CCTG------------CCCCAGCCAGTACCAGCGCCGTGGTTTCTGGAG--GCA--GAAACTTGCTTGTGGAGA 1990
Query 2053 --CGTCTTCGATGGCCCGGCCGCCCAGCCCAGCCTGGGGCCCACCCCCGAGGAGGCCTTCCTCAGCCCAGGTCC 2124
.||||.
Sbjct 1991 TTTGTCTG------------------------------------------------------------------ 1998
Query 2125 TGAGGACATCGGCCCTCCCATTCCGGAAGCCGATGAGTTGCTGAATAAGTTTGTGTGTAAGAACAACGGGGTCC 2198
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2199 TGTTCGAGAACCAGCTGCTGCAGATCGGAGTCAAGTCAGAGTTCCGACAGAACCTGGGCCGCATGTATCTCTTC 2272
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2273 TATGGCAACAAGACCTCGGTGCAGTTCCAGAATTTCTCACCCACTGTGGTTCACCCGGGAGACCTCCAGACTCA 2346
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2347 GCTGGCTGTGCAGACCAAGCGCGTGGCGGCGCAGGTGGACGGCGGCGCGCAGGTGCAGCAGGTGCTCAATATCG 2420
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2421 AGTGCCTGCGGGACTTCCTGACGCCCCCGCTGCTGTCCGTGCGCTTCCGGTACGGTGGCGCCCCCCAGGCCCTC 2494
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2495 ACCCTGAAGCTCCCAGTGACCATCAACAAGTTCTTCCAGCCCACCGAGATGGCGGCCCAGGATTTCTTCCAGCG 2568
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2569 CTGGAAGCAGCTGAGCCTCCCTCAACAGGAGGCGCAGAAAATCTTCAAAGCCAACCACCCCATGGACGCAGAAG 2642
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2643 TTACTAAGGCCAAGCTTCTGGGGTTTGGCTCTGCTCTCCTGGACAATGTGGACCCCAACCCTGGTGACAGAGAA 2716
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2717 GACACCAGGGTTTGGGGGATGCCTGGGACTTTCCTCCGGCCTTTTGTATTTTTATTTTTGTTCATCTGCTGCTG 2790
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2791 TTTACATTCTGGGGGGTTAGGGGGAGTCCCCCTCCCTCCCTTTCCCCCCCAAGCACAGAGGGGAGAGGGGCCAG 2864
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2865 GGAAGTGGATGTCTCCTCCCCTCCCACCCCACCCTGTTGTAGCCCCTCCTACCCCGCCCNCATCCAGGGGCTGT 2938
Sbjct 1999 -------------------------------------------------------------------------- 1998
Query 2939 GTATTATTG 2947
Sbjct 1999 --------- 1998
