Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14595
- Subject:
- NR_156180.2
- Aligned Length:
- 3404
- Identities:
- 907
- Gaps:
- 2495
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGACGGAGCGCGCTGAGCGGAGGGGGAGGTGGCTGCCGCTTCTCCCGCGTCCGCCATTTTGTTGCTGTGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTGGGAACAAGCTGGGCAAAAGCACCCCGGAGGCGCGACGCTCCTTCGAGTTCGGTGCCTCGTGTGACGGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTCGGTGAAGACCCGTCGAGCTGCGGCGCCGGCGCGTTCCAGGCCGGGAGTCACTGGAGGCACCCCTGGGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGAGCAGCCCGAGAACCCCGGGGTGGCCTCCGCTGCGGCTCGGGTTTGCCTGCCCCGACCCCCCGGCTCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGTGCATTCCCGGGCGGCTCTCTCCGTGTGGCGGCCCCGGAGCAGGCGGGCGGCGTCGGAGGATGCTGCGGGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGAGCCGAGAGGAAAGTGCTGGCCCAGCCCTCTGAGCGCTCCTCGAGGTGTGCGAGAGGCCCTTCCTCGGCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAAAGCCGTCTGCCGGGCTAAGGCGTGCAGAGCAGGCGAGGACAGCCGCCGCCCCTACCGCCGCAGAGTCCCCG 518
Query 1 ----------ATGTCCTCCGCCAGGTTCGACTCCTCGGACCGCTCCGCCTGGTATATGGGGCCGGTGTCTCGCC 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGGACCGCTCCGCCTGGTATATGGGGCCGGTGTCTCGCC 592
Query 65 AGGAGGCGCAGACCCGGCTCCAGGGCCAGCGCCACGGTATGTTCCTCGTCCGCGATTCTTCCACCTGCCCTGGG 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGAGGCGCAGACCCGGCTCCAGGGCCAGCGCCACGGTATGTTCCTCGTCCGCGATTCTTCCACCTGCCCTGGG 666
Query 139 GACTATGTGCTGTCGGTGGTCCGAGAACTCGCGGGTCTTCCCACTACATCATCAACTCGCTGCCCAACCGCCGT 212
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 667 GACTATGTGCTGTCGGT-GTCCGAGAACTCGCGGGTC-TCCCACTACATCATCAACTCGCTGCCCAACCGCCGT 738
Query 213 TTTAAGATCGGGGACCAGGAATTTGACCATTTGCCGGNCCTGCTGGAGTTTTACAAGATCCACTACCTGGACAC 286
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 739 TTTAAGATCGGGGACCAGGAATTTGACCATTTGCCGGCCCTGCTGGAGTTTTACAAGATCCACTACCTGGACAC 812
Query 287 CACCACCCTCATCGAGCCTGCGCCCAGGTATCCAAGCCCACCAATGGGATCTGTCTCAGCACCCAACCTGCCTA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 CACCACCCTCATCGAGCCTGCGCCCAGGTATCCAAGCCCACCAATGGGATCTGTCTCAGCACCCAACCTGCCTA 886
Query 361 CAGCAGAAGATAACCTGGAATATGTACGGACTCTGTATGATTTTCCTGGGAATGATGCCGAAGACCTGCCCTTT 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 CAGCAGAAGATAACCTGGAATATGTACGGACTCTGTATGATTTTCCTGGGAATGATGCCGAAGACCTGCCCTTT 960
Query 435 AAAAAGGGTGAGATCCTAGTGATAATAGAGAAGCCTGAAGAACAGTGGTGGAGTGCCCGGAACAAGGATGGCCG 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AAAAAGGGTGAGATCCTAGTGATAATAGAGAAGCCTGAAGAACAGTGGTGGAGTGCCCGGAACAAGGATGGCCG 1034
Query 509 GGTTGGGATGATTCCTGTCCCTTATGTCGAAAAGCTTGTGAGATCCTCACCACACGGAAAGCATGGAAATAGGA 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 GGTTGGGATGATTCCTGTCCCTTATGTCGAAAAGCTTGTGAGATCCTCACCACACGGAAAGCATGGAAATAGGA 1108
Query 583 ATTCCAACAGTTATGGGATCCCAGAACCTGCTCATGCATACGCTCAACCTCAGACCACAACTCCTCTACCTGCA 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 ATTCCAACAGTTATGGGATCCCAGAACCTGCTCATGCATACGCTCAACCTCAGACCACAACTCCTCTACCTGCA 1182
Query 657 GTTTCCGGTTCTCCTGGGGCAGCAATCACCCCTTTGCCATCCACACAGAATGGACCTGTCTTTGCGAAAGCAAT 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183 GTTTCCGGTTCTCCTGGGGCAGCAATCACCCCTTTGCCATCCACACAGAATGGACCTGTCTTTGCGAAAGCAAT 1256
Query 731 CCAGAAAAGAGTACCCTGTGCTTATGACAAGACTGCCTTGGCATTAGAGGTTGGTGACATCGTGNAAGTCACAA 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1257 CCAGAAAAGAGTACCCTGTGCTTATGACAAGACTGCCTTGGCATTAGAGGTTGGTGACATCGTGAAAGTCACAA 1330
Query 805 GGATGAATATAAATGGCCAGTGGGAAGGCGAAGTGAACGGGCGCAAAGGGCTTTTCCCCTTTACGCACGTCAAA 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 GGATGAATATAAATGGCCAGTGGGAAGGCGAAGTGAACGGGCGCAAAGGGCTTTTCCCCTTTACGCACGTCAAA 1404
Query 879 ATCTTTGACCCTCAAAACCCAGATGAAAACGAG----------------------------------------- 911
|||||||||||||||||||||||||||||||||
Sbjct 1405 ATCTTTGACCCTCAAAACCCAGATGAAAACGAGTGATTGCTGTTGCCCTGTTTCCTGCTGCTTTGTTGTTCTGC 1478
Query 912 -------------------------------------------------------------------------- 911
Sbjct 1479 CTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCTCTCATAGGCAAGTCACACTGCATTGCCGAAGTCCAGC 1552
Query 912 -------------------------------------------------------------------------- 911
Sbjct 1553 TTTCTGCAGACTGGCAGTCGCACACACATTTGGAATGCACACAGCGGCTGCCTCCTGATGTTTGTATCATAGTC 1626
Query 912 -------------------------------------------------------------------------- 911
Sbjct 1627 GTATTGTCAAAGAGTAGCCGATTTTAGAGTTCTTTTGGATCATAAACTGGAAATACTGATGGAAGCACACAAGT 1700
Query 912 -------------------------------------------------------------------------- 911
Sbjct 1701 GGAGAGAAGTTGACATGGAAAGGGTCTTCCTTCTCATTGCTGCCCGTTTGTACATGGGACTGATTCTGTTGTGT 1774
Query 912 -------------------------------------------------------------------------- 911
Sbjct 1775 TCACCAGAGAAAGCTTGAGGCCATGGCGAGATACTGCATGTTTGCTGTTCCACAAAGCAGTGGCTTAGCTGCCA 1848
Query 912 -------------------------------------------------------------------------- 911
Sbjct 1849 TCTTGCTTTTCTTTGGACAACAGGAAGTGAACCTTAAGGAAGAGAGAATTCTGTTCTAAAACTCCAAAATCTGG 1922
Query 912 -------------------------------------------------------------------------- 911
Sbjct 1923 CTTTTTTTTTTCTTTTGTTTTGGTTTGGTTTTGGAAAACTAATTAATTAGACTTGTGTGGGGGTTTTTTTTTGT 1996
Query 912 -------------------------------------------------------------------------- 911
Sbjct 1997 TTTGTTTTGTTTGTTTTGTTTTGTTTTTTTGAGACGGTGTCTCGCTGCATCACCCAGGCTGGAGTGCAGTGGCG 2070
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2071 CAATCTCGCCTTCCTGCAGTCTCCGCCTCCTGAGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGG 2144
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2145 ACTGCAGGCGCGCACACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCATCATGTTGACCAG 2218
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2219 GCTGGTCTCAAACTCCTGACTTCAGGTGATCCACCCGCCTTCAGCCTCCCAACGTGCTGGGATTACAGCCGTGA 2292
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2293 GCCGCCGCGCCTGGCCTAGACTTGTGTGTTCTAAACAGGTTAAGTAGCAGGTTGGGTTTTTATGATAGTGCAAG 2366
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2367 GAATGACTCATGCCTCTGAGCTTCTAAACTGAAGCTGCTGTAACTAAAGGAATCTGAAAAGAACAACCCTGAAG 2440
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2441 CAGAGGCCTTTATTGTCTTGGTTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCA 2514
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2515 GTTGTGGTGTGCCATGCTATGTGCACAGCCCCTTGGATTACTTTGTTTTAAAAAGCATCAGAGTTGGGGGTACT 2588
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2589 TTAGGGAAACCTTTGCTTACCTTGTTTTGCCAGTGATAAGAGCAGTGGGTTGGAGGGCACTTGGCCAGTTTTCT 2662
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2663 GTTCAGCTTTTCAGTGAATGTACCCCTTTAAGGTTCAGACTTAAACTTCCTTAAAAAGTGGCGTTGTTCATAGA 2736
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2737 ATCGTTGGACTCATTAATGAATCGTTCAACTCCACTCACTGAAGCCCAGACCTCCGTGCCCAGGCCCAATCTCG 2810
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2811 TCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTCTAATACCTAAGACTAATGCTTTCTGTG 2884
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2885 GACACCACTGAGCTCTGCCTCAACTCCACCCTCTGCGACCGGAGGACTATGCCCCTAGTAACTGCTGTCGGTGT 2958
Query 912 -------------------------------------------------------------------------- 911
Sbjct 2959 GGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGG 3032
Query 912 -------------------------------------------------------------------------- 911
Sbjct 3033 AGGAACAGTGGCCTTGCTTCTTAGACGGTCTTCACTGTGTGTTTTAAAACAACAACAACAACAACAACAACAAC 3106
Query 912 -------------------------------------------------------------------------- 911
Sbjct 3107 ATAAAACTCTTTTGACCTGTAACTTAAAGATCATAAACTTCAGGCAATAATATTTTCTGTGTAAGCTTTTAAAA 3180
Query 912 -------------------------------------------------------------------------- 911
Sbjct 3181 TTATTTTTGGGGATCATAGCTTGTTTTATTTTGTGCTATAAAATTAACAGTATTAAATGACTTATATTCTTAGA 3254
Query 912 -------------------------------------------------------------------------- 911
Sbjct 3255 ATACATCGAGTGTCTTTTCTTAACAGATTAGTGCCTTTTTATTTTTGTATTCCGTTTTACGTTACTGGTCCCAG 3328
Query 912 -------------------------------------------------------------------------- 911
Sbjct 3329 CATCAAAACCCTTGTTTCCATGGCCTGTTTGTATATTGTCTCAATAAAACTTGCATCAGCCGGTGGTGGCGGCA 3402
