Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14800
- Subject:
- XR_243293.1
- Aligned Length:
- 1929
- Identities:
- 1135
- Gaps:
- 792
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGGCGCGCGCGGCCCTGCGGGTGACAGGCAGGCGGGAAGGGGCGGGGCCTCGGGCGGGGCCGCCGTGGGGAGG 74
Query 1 --------------------------ATGGCGGCGGCGGCGGCTCAGGGGGGCGGGGGCGGGGAGCCCCGTAGA 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGGCGGTGGGAGGGGAGGAGTGGAGATGGCGGCGGCGGCGGCTCAGGGGGGCGGGGGCGGGGAGCCCCGTAGA 148
Query 49 ACCGAGGGGGTCGGCCCGGGGGTCCCGGGGGAGGTGGAGATGGTGAAGGGGCAGCCGTTCGACGTGGGCCCGCG 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACCGAGGGGGTCGGCCCGGGGGTCCCGGGGGAGGTGGAGATGGTGAAGGGGCAGCCGTTCGACGTGGGCCCGCG 222
Query 123 CTACACGCAGTTGCAGTACATCGGCGAGGGCGCGTACGGCATGGTCAGCTCGGCCTATGACCACGTGCGCAAGA 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTACACGCAGTTGCAGTACATCGGCGAGGGCGCGTACGGCATGGTCAGCTCGGCCTATGACCACGTGCGCAAGA 296
Query 197 CTCGCGTGGCCATCAAGAAGATCAGCCCCTTCGAACATCAGACCTACTGCCAGCGCACGCTCCGGGAGATCCAG 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCGCGTGGCCATCAAGAAGATCAGCCCCTTCGAACATCAGACCTACTGCCAGCGCACGCTCCGGGAGATCCAG 370
Query 271 ATCCTGCTGCGCTTCCGCCATGAGAATGTCATCGGCATCCGAGACATTCTGCGGGCGTCCACCCTGGAAGCCAT 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATCCTGCTGCGCTTCCGCCATGAGAATGTCATCGGCATCCGAGACATTCTGCGGGCGTCCACCCTGGAAGCCAT 444
Query 345 GAGAGATGTCTACATTGTGCAGGACCTGATGGAGACTGACCTGTACAAGTTGCTGAAAAGGCCAGCAGCTGAGC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 445 GAGAGATGTCTACATTGTGCAGGACCTGATGGAGACTGACCTGTACAAGTTGCTGAAAA-GCCAGCAGCTGAGC 517
Query 419 AATGACCATAATCTGCTACTTCCTCTACCAGATCCTGCGGGGCCTCAAGTACATCCACTCCGCCAACGTGCTCC 492
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 AATGACCAT-ATCTGCTACTTCCTCTACCAGATCCTGCGGGGCCTCAAGTACATCCACTCCGCCAACGTGCTCC 590
Query 493 ACCGAGATCTAAAGCCCTCCAACCTGCTCATCAACACCACNTGCGACNTTAAGATTTGTGATTTCGGCCTGGCC 566
||||||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||
Sbjct 591 ACCGAGATCTAAAGCCCTCCAACCTGCTCATCAACACCACCTGCGACCTTAAGATTTGTGATTTCGGCCTGGCC 664
Query 567 CGGATTGCCGATCCTGAGCATGACCACACCGGCTTCCTGACGGAGTATGTGGCTACGCGCTGGTACCGGGCCCC 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 CGGATTGCCGATCCTGAGCATGACCACACCGGCTTCCTGACGGAGTATGTGGCTACGCGCTGGTACCGGGCCCC 738
Query 641 AGAGATCATGCTGAACTCCAAGGGCTATACCAAGTCCATCGACATCTGGTCTGTGGGCTGCATTCTGGCTGAGA 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 AGAGATCATGCTGAACTCCAAGGGCTATACCAAGTCCATCGACATCTGGTCTGTGGGCTGCATTCTGGCTGAGA 812
Query 715 TGCTCTCTAACCGGCCCATCTTCCCTGGCAAGCACTACCTGGATCAGCTCAACCACATTCTGGGCATCCTGGGC 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 TGCTCTCTAACCGGCCCATCTTCCCTGGCAAGCACTACCTGGATCAGCTCAACCACATTCTGGGCATCCTGGGC 886
Query 789 TCCCCATCCCAGGAGGACCTGAATTGTATCATCAACATGAAGGCCCGAAACTACCTACAGTCTCTGCCCTCCAA 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TCCCCATCCCAGGAGGACCTGAATTGTATCATCAACATGAAGGCCCGAAACTACCTACAGTCTCTGCCCTCCAA 960
Query 863 GACCAAGGTGGCTTGGGCCAAGCTTTTCCCCAAGTCAGACTCCAAAGCCCTTGACCTGCTGGACCGGATGTTAA 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GACCAAGGTGGCTTGGGCCAAGCTTTTCCCCAAGTCAGACTCCAAAGCCCTTGACCTGCTGGACCGGATGTTAA 1034
Query 937 CCTTTAACCCCAATAAACGGATCACAGTGGAGGAAGCGCTGGCTCACCCCTACCTGGAGCAGTACTATGACCCG 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 CCTTTAACCCCAATAAACGGATCACAGTGGAGGAAGCGCTGGCTCACCCCTACCTGGAGCAGTACTATGACCCG 1108
Query 1011 ACGGATGAGCCAGTGGCCGAGGAGCCCTTCACCTTCGCCATGGAGCTGGATGACCTACCTAAGGAGCGGCTGAA 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 ACGGATGAGCCAGTGGCCGAGGAGCCCTTCACCTTCGCCATGGAGCTGGATGACCTACCTAAGGAGCGGCTGAA 1182
Query 1085 GGAGCTCATCTTCCAGGAGACAGCACGCTTCCAGCCCGGAGTGCTGGAGGCCCCC------------------- 1139
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183 GGAGCTCATCTTCCAGGAGACAGCACGCTTCCAGCCCGGAGTGCTGGAGGCCCCCTAGCCCAGACAGACATCTC 1256
Query 1140 -------------------------------------------------------------------------- 1139
Sbjct 1257 TGCACCCTGGGGCCTGGAACAGAACTGGCAAAGAGGCAAGAGGTCACTGAGGGCCTCTGTCACCCAGGACCTGC 1330
Query 1140 -------------------------------------------------------------------------- 1139
Sbjct 1331 CTCCTGCCTGCCCCTCTCCCGCCAGACTGTTAGAAAATGGACACTGTGCCCAGCCCGGACCTTGGCAGCCCAGG 1404
Query 1140 -------------------------------------------------------------------------- 1139
Sbjct 1405 CCGGGGTGGAGCATGGGCCTGGCCACCTCTCTCCTTTGCTGAGGCCTCCAGCTTCAGGCAGGCCAAGGCCTTCT 1478
Query 1140 -------------------------------------------------------------------------- 1139
Sbjct 1479 CCTCCCCACCCGCCCTCCCCACGGGGCCTCGGGACCTCAGGTGGCCCCAGTTCAATCTCCCGCTGCTGCTGCTG 1552
Query 1140 -------------------------------------------------------------------------- 1139
Sbjct 1553 CGCCCTTACCTTCCCCAGCGTCCCAGTCTCTGGCAGTTCTGGAATGGAAGGGTTCTGGCTGCCCCAACCTGCTG 1626
Query 1140 -------------------------------------------------------------------------- 1139
Sbjct 1627 AAGGGCAGAGGTGGAGGGTGGGGGGCGCTGAGTAGGGACTCAGGGCCATGCCTGCCCCCCTCATCTCATTCAAA 1700
Query 1140 -------------------------------------------------------------------------- 1139
Sbjct 1701 CCCCACCCTAGTTTCCCTGAAGGAACATTCCTTAGTCTCAAGGGCTAGCATCCCTGAGGAGCCAGGCCGGGCCG 1774
Query 1140 -------------------------------------------------------------------------- 1139
Sbjct 1775 AATCCCCTCCCTGTCAAAGCTGTCACTTCGCGTGCCCTCGCTGCTTCTGTGTGTGGTGAGCAGAAGTGGAGCTG 1848
Query 1140 -------------------------------------------------------------------------- 1139
Sbjct 1849 GGGGGCGTGGAGAGCCCGGCGCCCCTGCCACCTCCCTGACCCGTCTAATATATAAATATAGAGATGTGTCTATG 1922
Query 1140 ----- 1139
Sbjct 1923 GCTGA 1927
