Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_14950
• Subject: XM_011544014.2
• Aligned Length: 1443
• Identities: 722
• Gaps: 699

Alignment

Query    1  ATGAGAGATGTTACCATTGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATATATAAAAAACTGGAGGCCAAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATACTTCCTTTTGAAGACAGATGGCTCATTCATAGGATATAAAGAGAAACCTCAAGATGTGGATTTACCTTATC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCCTCAACAACTTTTCAGTGGCAAAATGCCAGTTAATGAAAACAGAACGACCAAAGCCAAACACATTTATAATC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGATGTCTCCAGTGGACTACTGTTATAGAGAGAACATTTCATGTAGATACTCCAGAGGAAAGGGAAGAATGGAC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGAAGCTATCCAGGCTGTAGCAGACAGACTGCAGAGGCAAGAAGAGGAGAGAATGAATTGTAGTCCAACTTCAC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AAATTGATAATATAGGAGAGGAAGAGATGGATGCCTCTACAACCCATCATAAAAGAAAGACAATGA-ATGATTT  443
                                                                          |||| .|.||||
Sbjct    1  --------------------------------------------------------------ATGAGTTCATTT  12

Query  444  TGACTATTTGAAACTACTAGGTAAAGGCACTTTTGGGAAAGTTATTTTGGTTCGAGAGAAGGCAAGTGGAAAAT  517
            ...|.|||                     |||.||||         |||||                       
Sbjct   13  ATTCAATT---------------------CTTATGGG---------TTGGT-----------------------  33

Query  518  ACTATGCTATGAAGATTCTGAAGAAAGAAGTCATTATTGCAAAGGATGAAGTGGCACACACTCTAACTG-AAAG  590
                          |||             ||.|||||.|||||                    ||||| ||| 
Sbjct   34  --------------ATT-------------TCTTTATTACAAAG--------------------AACTGCAAA-  59

Query  591  CAGAGTATTAAAGAACACTAGACATC-CCTTTTTAACATCCTTGAANTATNCNTNCCAGANAAAAGACNGTTTG  663
             ||||               ||.||| ||||       .||||                |.||||.|...|||.
Sbjct   60  -AGAG---------------GATATCGCCTT-------ACCTT----------------ACAAAATAAGATTTA  94

Query  664  TGTTTTGTGATGGAATATGTTANNGGGGGCGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTCTCTGAGGA  737
            .|||   |||                            |||.||                          ||.|
Sbjct   95  GGTT---TGA----------------------------TTTACA--------------------------AGCA  111

Query  738  CCGCACACGTTTCTATGGTGCAGAAATTGTCTCTGCCTTGGACTATCTACATTCCCGGNAAGATTTGTGGTACC  811
            ||.|                ||.|||                      |||||                     
Sbjct  112  CCAC----------------CAAAAA----------------------ACATT---------------------  126

Query  812  GTGATCTCAAGTTGGAGAATCTAATGCTGGACAAAGATGGCCACATAAAAATTACAGATTTTGGACTTTGCAAA  885
                |||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  127  ----TCT----TTGGAGAATCTAATGCTGGACAAAGATGGCCACATAAAAATTACAGATTTTGGACTTTGCAAA  192

Query  886  GAAGGGATCACAGATGCAGCCACCATGAAGACATTCTGTGGCACTCCAGAATATCTGGCACCAGAGGTGTTAGA  959
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  193  GAAGGGATCACAGATGCAGCCACCATGAAGACATTCTGTGGCACTCCAGAATATCTGGCACCAGAGGTGTTAGA  266

Query  960  AGATAATGACTATGGCCGAGCAGTAGACTGGTGGGGCCTAGGGGTTGTCATGTATGAAATGATGTGTGGGAGGT  1033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  267  AGATAATGACTATGGCCGAGCAGTAGACTGGTGGGGCCTAGGGGTTGTCATGTATGAAATGATGTGTGGGAGGT  340

Query 1034  TACCTTTCTACAACCAGGACCATGAGAAACTTTTTGAATTAATATTAATGGAAGACATTAAATTTCCTCGAACA  1107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  341  TACCTTTCTACAACCAGGACCATGAGAAACTTTTTGAATTAATATTAATGGAAGACATTAAATTTCCTCGAACA  414

Query 1108  CTCTCTTCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGACC  1181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  415  CTCTCTTCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGACC  488

Query 1182  AGATGATGCAAAAGAAATTATGAGACACAGTTTCTTCTCTGGAGTAAACTGGCAAGATGTATATGATAAAAAGC  1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  489  AGATGATGCAAAAGAAATTATGAGACACAGTTTCTTCTCTGGAGTAAACTGGCAAGATGTATATGATAAAAAGC  562

Query 1256  TTGTACCTCCTTTTAAACCTCAAGTAACATCTGAGACAGATACTAGATATTTTGATGAAGAATTTACAGCTCAG  1329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  563  TTGTACCTCCTTTTAAACCTCAAGTAACATCTGAGACAGATACTAGATATTTTGATGAAGAATTTACAGCTCAG  636

Query 1330  ACTATTACAATAACACCACCTGAAAAATATGATGAGGATGGTATGGACTGCATGGACAATGAGAGGCGGCCGCA  1403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  637  ACTATTACAATAACACCACCTGAAAAATATGATGAGGATGGTATGGACTGCATGGACAATGAGAGGCGGCCGCA  710

Query 1404  TTTCCCTCAATTTTCCTACTCTGCAAGTGGACGAGAA  1440
            |||||||||||||||||||||||||||||||||||||
Sbjct  711  TTTCCCTCAATTTTCCTACTCTGCAAGTGGACGAGAA  747