Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15071
- Subject:
- NR_138026.2
- Aligned Length:
- 6324
- Identities:
- 407
- Gaps:
- 5917
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGGTCCTGAGTCGCGACCCTGGTCCGGACCTGACCTGAATTGCGACCCCAACCTGGACTGCTCCCCTGAC 74
Query 1 --------------------------ATGGCCCGGCACGTGTTCCTAACGGGGCCCCCAGGAGTTGGAAAAACA 48
|||||||||||||||||||||||||||||||||
Sbjct 75 CGCAACCCCTACCCCCGCCCACCAGTATGGCCCGGCACGTGTTCCTAACGGGGCCCCCA--------------- 133
Query 49 ACATTGATCCATAAAGCCAGTGAGGTTTTAAAATCCTCTGGTGTGCCTGTTGATGGATTTTATACCGAAGAAGT 122
Sbjct 134 -------------------------------------------------------------------------- 133
Query 123 CAGACAGGGAGGGAGAAGAATAGGATTCGATGTCGTCACGTTGTCCGGCACCCGGGGGCCTTTATCGAGAGTTG 196
Sbjct 134 -------------------------------------------------------------------------- 133
Query 197 GGTTAGAGCCTCCACCTGGAAAACGTGAATGCCGAGTTGGGCAGTATGTGGTCGACCTGACTTCTTTTGAGCAG 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 134 GGTTAGAGCCTCCACCTGGAAAACGTGAATGCCGAGTTGGGCAGTATGTGGTCGACCTGACTTCTTTTGAGCAG 207
Query 271 TTGGCACTACCCGTCTTGAGGAATGCCGACTGCAGCAGTGGCCCAGGGCAAAGAGTGTGCGTCATCGATGAGAT 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 208 TTGGCACTACCCGTCTTGAGGAATGCCGACTGCAGCAGTGGCCCAGGGCAAAGAGTGTGCGTCATCGATGAGAT 281
Query 345 TGGGAAGATGGAGCTCTTCAGTCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCCCAGGGACTATAA 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 282 TGGGAAGATGGAGCTCTTCAGTCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCCCAGGGACTATAA 355
Query 419 TCCTTGGCACAATCCCAGTTCCTAAAGGAAAGCCACTGGCTCTTGTAGAAGAAATCAGAAACAGAAAGGATGTG 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 TCCTTGGCACAATCCCAGTTCCTAAAGGAAAGCCACTGGCTCTTGTAGAAGAAATCAGAAACAGAAAGGATGTG 429
Query 493 AAGGTGTTTAATGTCACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAGCAGCAG 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 430 AAGGTGTTTAATGTCACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAGCAGCAG 503
Query 567 GAAG---------------------------------------------------------------------- 570
||||
Sbjct 504 GAAGTGAAGACACGTGCATTCCTGCCTTCCGTGAAGGAGTGCCCAGTTCAAGAGGAGCCTGATGGAGCCCTGCC 577
Query 571 -------------------------------------------------------------------------- 570
Sbjct 578 TGTCGAGGCTGTATGCCTATGGGGTTATGGAACCTTGTGGGCTTTTCTAGAGAAAACTCAACAGCTGTTTCCCA 651
Query 571 -------------------------------------------------------------------------- 570
Sbjct 652 TAAAATGTTTAAAAGATCAAATTAGCCTTAATGCTGGATTGTCTGTACAAGATTAACTATCCATTGTGGCTTAT 725
Query 571 -------------------------------------------------------------------------- 570
Sbjct 726 CTATGCTTAAAGATTTCTTGTTTATTTCCTCTTGCAGTCATGCACATGATTTGGGTAAACTGTGAGATGAGAAA 799
Query 571 -------------------------------------------------------------------------- 570
Sbjct 800 TGGTTTTCAGAGTATTAGATGGAATTCACCCCCGTTGAAGTTTATAAATGTGTTCAGGGGAAGCGGGAGGAAAG 873
Query 571 -------------------------------------------------------------------------- 570
Sbjct 874 AGTTCACTGCCTAATCAGTTTTGCATGTCATGAAAATTAAATTCCTCTCCAGGTGCAGCTTCAGCCTCATGCAA 947
Query 571 -------------------------------------------------------------------------- 570
Sbjct 948 CTTAAAGTGATAACAGTTATTTGATTTTTTAAAAAATATTATTCCAAAAGAAAACCATTTTAGGTCATCTCCCC 1021
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1022 CAACTCTGTTTGCTTACTGCTTAATAAATATAAAAATAAATCTGATGGTTACAGACAGGAGGCATTGTGTGGGA 1095
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1096 GGAATACACAACCTTTGGAAGTGTTGATAGCATCTGATATTCAGCCGACCAGATGACAAGAGCTCAGGCCCACG 1169
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1170 GGTTTGCATAAGAGCACTGCTTTGCCTTAGTTTACTCGGGAGCAATTTTGAATCTTTCTATGCCTAGTTTCCCT 1243
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1244 TCCAGAAAAGCAGGAAGTGGCTGTCATCTCAGGAGTGATGTCACACCACAGAAGGAAACTGTCAACCACTCCAC 1317
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1318 ACAACTGTGGAGAGTGCCCAGTGCCAGGGGCTGGGCTTATCAGGAATAATGGTGTAGCAATGCGGAGTTCAGCC 1391
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1392 CATAACAGGGGTACTATAAAAATGAAGTAGGAAAGTAGAAGAGACCCCTGAAACCCCAGAACTGATAGAGGATA 1465
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1466 AAAACTTCCCTCCAAGTGGTAGATGGTACTGGAGTGATAAACAGTTCAGTGTTTTTAGGTCATTTTTGGTGAAG 1539
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1540 ATCTATGAATTTCCAGGATTTTTTTTTAACAAATTAGCATTGGCTACAAACCCACTGGTATAAGCAGCAGTGTG 1613
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1614 CCTTCTCTCTAACTGTGGACAAGTCGGGCATGTGGCGGGTGAGGAGCCCTGGGCTGGGCACTGGGGCACAGTGA 1687
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1688 ATGGGGCGGGAGGGGCTCACATCAAAACCAAAATGGCACGCAGCCCAGGTCTGGTTCCTCCATCAGTGTCTCTT 1761
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1762 TCCTCAGCGCTTTTCTTCCGAGGTAACTTTGTGAAGCTTGACTTGGACTTGCCTAGCCTTGGAGGGACCACAAC 1835
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1836 AGGGAGGCCTAATAGATTATGAACTAAGCCCTCAAAAGGGCTACCTGCCCAGGAGGAGGAAGTGGGCATCTCCT 1909
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1910 TCCACAGTCCCTGCCTGGCGGGGCTGTTCAGGGAGACTGAGTTCCGAGCTCAGGATGTCTGGCAGGCTGGCTGT 1983
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1984 GACTTCCAGCCACCATCACCAGGACACCGGTGTGGGCTGCATGCCTCAGTGGGCCAGGAGAGGCACGGCCTCTG 2057
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2058 AGTTGGGTAGAGGCTTCCCACAAAGGCCTGGGAACCTGATCCTGGCCGTAAATCTGAAAGTACCACAGCCCTCA 2131
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2132 GGAGAACCAAGAGATAGGGAGGCAGGCTGGGGAAATGTCATCAATGTGCACCCAGGCGTGGTGGAGCTGGTCAG 2205
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2206 CCCCAGCTGGAGTGGGACCCCATCAAGATGGAGCCTTTCCTGGCACCTCCGGGAGGCCGTTTTGCGTTTCCGCC 2279
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2280 CTTCATGCATCTGAAACACCAAGGGCCATGTTCCTTCTGGTGCTTGTCCTTTTGAGCTTGGTGTTTCAGCCGTG 2353
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2354 TCTGTTTTGTAGACTTTGATTTTGTCTTAAATGAGAAAGAAAGCTGGTGAAGGTTATTTCAAAGTTAAATAGCT 2427
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2428 AGTCTGAGGGGCTTATCACTGAAGCCAGTTGTGCTTATGTGGGGTGGGAGTGTCACTGCCTACTTGAAAGTATG 2501
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2502 CACTTGTGTGGAACAGATTCAGGGTGGCCCCTAGCACTTGGGGCTGCGGGAGCTTCTGCACACTTTCCCTTTAA 2575
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2576 CGGTAAAGAGACAAGCTTGGAGTGTTTAAGTGGTTCGTTCAGGAGCACAGTGATAGCGGTGACAAAGGAGATTT 2649
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2650 GAACCCACGTCTGCGTGGCTCCAAAGTTCACTCTTTCATCACTCCCTGCTGCGTCCTTCTTGAGGCTTTAGCAT 2723
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2724 TTTTAGTGTGTTTTGTGCCCCCAGACCTCAGAGTTGACATTTAGCAGTGATAAACTGCTGTAAATCCAAAGAAC 2797
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2798 GTTTAGTGTCTCTTGTGGTGAGGTCCTGAAATGATTGTTGTATTAGTCAAACAGAATGATCATGGAGCATGTAT 2871
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2872 GGAGATGTCAGATGCAATCCCTGTATTGTAAGGCAATGACATTTAATGAAGGATAAGATGAATTCACAGATAAC 2945
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2946 TAGAACTCAGGGCCAAACGCACACAGCCTGTAGCAACAGTGTCATGCTGAGATTTAAAGGAAGAAGAGGTGCCG 3019
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3020 TGGCAGAACTCCACGTGACCGTCCCCTCCCTGCACGCAGCCAGGATGAGAGGAGCAGAGCTGAGCGCCACCTCC 3093
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3094 CTGTCGGTGCCACGGCTGAGGTGAGGAGCTCTTGCCGGATGGTGGGGTGGGGGCAGCAGGGCAGATTGAAGTCA 3167
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3168 GGGATTCTCTTATACCTGAGTTTGGAATGCCTCCTATTCAAACAAAGCAAAATATCTAACAGATGGTTGGATAT 3241
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3242 GAGTCTCAGGGAGGAATTCAATTTGAAAAGCACAGAATTAACATGTATTGCTTATATGAAGAATCTCAGCTAGA 3315
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3316 ATAACAAGGTCGGATGGGAGGAATCAGGACTGATTTGAAGCACGATTTACTAAATCATTCTTTCCTTTTCCTCC 3389
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3390 TTAGCAGATCATACCGCCAGCTGCTTAACACGTAATAGTTTAATAAATTGTTTCTTCTTACCTCTCAGTGAGGG 3463
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3464 TAAGCACATGCAGGGAGATGGGTGAGTCTTTTAAATGGATAGTGTCATCTCTGATGATCAGCCTTGACAGGGAG 3537
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3538 AGATCCTAGTAAAGCTGCAAATTCAGGCACTCAGTTCCCAGCCCTCCAGTTATCAAGGGGGTGGGAACGCTGGT 3611
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3612 GGGCTGGAAAATGTGGAACAGACCTGCTCCTCTTCTTTTCCTGCCAATTACCGTATTCATAGAAGGTTGTGTCT 3685
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3686 GTGGATCACACCTGTGTGTGTGCTGATGGCGGATGCTTGTGTAGCATAGTGACTTGGGACAAAACAGCATGGTA 3759
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3760 GATGAGGCTGGAGACGGGTGGGCTAAGTAAACAGGCATTGCATTGCACATTTTGTGGGCAAAGAAGTTGAAGCA 3833
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3834 TCGCATGATTTTAACAAATTACTTGCCAGATGATTTCAACACACTGCAAAATTTAGAATCAATAATGCCAAATT 3907
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3908 GGCCACATGATTTATATAAAACCAAGTGCTATGGTTTTAATATTATCTTTAGAGGAGAAACCATTTTGATCTGT 3981
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3982 GTCCAAATAACTCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCTTGAGCTGGAGTGCAGTG 4055
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4056 GTGCTATCTCGGCTCACTGTAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAACCTCCTGAGTAGCT 4129
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4130 GGGATTACAGGCACCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTG 4203
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4204 GCCAAGCTGGTCTCGAACTCCTGACCTCATGATTTGCCTGCCTCAGCCTACAAAAGTGCTGGGATTACAGGCGT 4277
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4278 GAGCCACCGTGCCCAGCCCCCAAATAACTCTTGAACTGGAAAATAACTCTTTAGCTATATACTGGCAGAATATT 4351
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4352 TGAACAACTCTAGCAAGAAATGTCAGTTTAGGGATGCCTCCTCTAAATGGGGGCTTAGAATATAACATTTTGCA 4425
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4426 GGAAGTCCTTTCTGATACATAGCTGACTAGATGAAGGACCAGATTAACAAGTTCATGAGTTGTAAATATAAAAG 4499
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4500 TTGTGTACCACGATAAAAAAGAAAAAGAAGTATGGCTGCACTGTTGATGGCTGGTCAAACAGCCCCCAAGAATC 4573
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4574 CTGGGGTGACTCCAATACTGCCACCTTTTCTCTGTGGGTGCAGTTGCCTGCGGATGTGTGTGCACATCTGTGCC 4647
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4648 TCGGTATGCACACTCGAGATGCCCGCTCTCATAGACGGTGCAGAGCGTCACTGCATTCCTATCTGATTAATGTG 4721
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4722 ACCTTAGTGTTGTAGATACACTGTGTCACTTTCATCCTCCCTCCTCCCCACAAAAGATGCCACGAGAACTCGTG 4795
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4796 AACTGTGATAAGCAATGAACAGAATAACTGTTGAAGAAGCACCTCATGAACCTCCCCAGAGAAACGGGATGGAG 4869
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4870 GAGCACCCAGGGTGCTCTTGCTCTCTTGCCTGCGCTGCCATTTCCTTCCAGCCTGGGTTTCTAGCTCTTTGGGG 4943
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4944 AGATTCCCCGTTTTGTGGAATGCTTTCTGTGTTTCCTACTTCTGGATGCCTAAGGAGTGGCCAGTCATACTCCT 5017
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5018 GGCTGACCACTGCCAGGCACCGTGGTTTTCCTCACTGAACTCAAGGAGTCACCCTCCGTGGGGAGGCCACACTC 5091
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5092 ACAGCTCCAGGCCTGCCATTTAGCCCTTGGGGCTTGGCTGTAAAGTTGCCCAAGAGGATTACAGGAGCTGCCAG 5165
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5166 CCAAGTTTAATTTGGCCACCTTAGAGAACTGCAGCAAGGCCCTATCAGCTTCCCATTAGACAAACAACTGCATT 5239
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5240 TAAATTAAATAAAGTTTGCACCTCTAGGGAGTGCTGACCTGAAAATAAGAACCTTCTGTCTGTGATTATAGAGT 5313
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5314 ACACTTGCTTTTATTAATTGCTGATTCTTAGTTTACAAAAAAAAAAATTAGAAAAGCATTACCATTTACTTTCC 5387
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5388 AAGGGGCAAGAGATTCTCTACAATACCCTTCCCCCAACCCTCTCCTCAAATTTCCAAATCCTAAATACTTTGAA 5461
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5462 GAAATTTGTGTGACTGTTTAAAATTGAGTATTTCCTTCTAACTATTGTCTTTTGAAAAGGGATGGTTCACCAGG 5535
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5536 CCAGTGATACTCTATGGACTGCATTTTGGGACCTCTACCCCAGCAAGGATACAGGTTCCTGGGGTCTTGAAGAT 5609
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5610 GGGAAAAGTTGTCTCAGAATTTACCCAAATGTCGTTCTCACCATAAAAGATATACTTGTAGAAATGAGAAGCTT 5683
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5684 CAGTATAACTCAAAACACTGGACGCAGCAATAACTATAAACATTTTAATTTCAAAAACAAAGGTGTGTGCGATG 5757
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5758 TTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTGGCGG 5831
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5832 CCCACCAATCGCCTGGACTACAGTGAGGAGCATTGTGTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTC 5905
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5906 AGTTTCTAAACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCAC 5979
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5980 GGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGCATAAATATTATAAAGAAATAGGGTTTTCTT 6053
Query 571 -------------------------------------------------------------------------- 570
Sbjct 6054 GACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCAT 6127
Query 571 ---------------------------------- 570
Sbjct 6128 GGTAACAGTAATGTATAAAGTGCCGATGATGTAA 6161
