Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15300
- Subject:
- XM_011245826.2
- Aligned Length:
- 3402
- Identities:
- 1028
- Gaps:
- 2268
Alignment
Query 1 ATGCAATTCCCCTCGCCTCCAGCCGCGAGGAGCTCCCCGGCGCCGCAGGCAGCGTCCTCCTCCG-AAGCAGCTG 73
||||||||||||||||||||||||||.|||||||||||||||.||||||||||.||.||| ||| |||||||||
Sbjct 1 ATGCAATTCCCCTCGCCTCCAGCCGCCAGGAGCTCCCCGGCGGCGCAGGCAGCATCGTCC-CCGCAAGCAGCTG 73
Query 74 CACCTGCAACTGGGCAGCCTGGACCCTCGTGCCCTGTTC-CCGGGACCTCGCGCAGGGGGCGCCCCGGGACACC 146
|.||.|||.|||||||||||||||||||||||||||..| ||||| ||||||||.||||||||||||||||..|
Sbjct 74 CTCCAGCACCTGGGCAGCCTGGACCCTCGTGCCCTGCGCACCGGG-CCTCGCGCGGGGGGCGCCCCGGGACTTC 146
Query 147 CCCTGCGGGCCGGGTGGAGGAGGAAGAGGAGGAGGAGGAAGAAGA------CGTGGACAAGGACCCCCATCCTA 214
||||||||.|||||||||||||||||||||||||||||||||||| |.|||...||||||||||..|||
Sbjct 147 CCCTGCGGACCGGGTGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAGAGCTTGGTTCAGGACCCCCACGCTA 220
Query 215 CCCAGAACACCTGCCTGCGCTGCCGCCACTTCTCTTTAAGGGAGAGGAAAAGAGAGCCTAGGAGAACCATGGGG 288
|...|||||||||.|||||||||.|||||||||.|||||| |||||.||||||.||.|..|||.||||||||
Sbjct 221 CTAGGAACACCTGGCTGCGCTGCTGCCACTTCTTTTTAAG---GAGGAGAAGAGAACCAACCAGAGCCATGGGG 291
Query 289 GGCTGCGAAGTCCGGGAATTTCTTTTGCAATTTGGTTTCTTCTTGCCTCTGCTGACAGCGTGGCCAGGCGACTG 362
|||||||||||||||||||||||||||||||||||||||||||||||.|||||.||.||.|||.|.||||||||
Sbjct 292 GGCTGCGAAGTCCGGGAATTTCTTTTGCAATTTGGTTTCTTCTTGCCCCTGCTAACGGCTTGGACCGGCGACTG 365
Query 363 CAGTCACGTCTCCAACAACCAAGTTGTGTTGCTTGATACAACAACTGTACTGGGAGAGCTAGGATGGAAAACAT 436
|||||||||||| |||||||||||||||||||||||||||.||.||..|||||||.||||||||||||||||
Sbjct 366 CAGTCACGTCTC---CAACCAAGTTGTGTTGCTTGATACAACCACAGTGATGGGAGAACTAGGATGGAAAACAT 436
Query 437 ATCCATTAAATGGGTGGGATGCCATCACTGAAATGGATGAACATAATAGGCCCATTCACACATACCAGGTATGT 510
|||||||||||||||||||||||||.|||||||||||||||||.|||||||||||.||.||||||||||||||.
Sbjct 437 ATCCATTAAATGGGTGGGATGCCATTACTGAAATGGATGAACACAATAGGCCCATACATACATACCAGGTATGC 510
Query 511 AATGTAATGGAACCAAACCAAAACAACTGGCTTCGTACAAACTGGATCTCCCGTGATGCAGCTCAGAAAATTTA 584
|||||.||||||||||||||.|||||||||||||||||.|||||||||||.||||||||.||.|||||||||||
Sbjct 511 AATGTCATGGAACCAAACCAGAACAACTGGCTTCGTACTAACTGGATCTCTCGTGATGCTGCACAGAAAATTTA 584
Query 585 TGTGGAAATGAAATTCACACTAAGGGATTGTAACAGCATCCCATGGGTCTTGGGGACTTGCAAAGAAACATTTA 658
||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.||||||||.||||
Sbjct 585 TGTGGAAATGAAGTTCACACTGAGGGATTGTAACAGCATCCCATGGGTCTTGGGGACTTGTAAAGAAACCTTTA 658
Query 659 ATCTGTTTTATATGGAATCAGATGAGTCCCACGGAATTAAATTCAAGCCAAACCAGTATACAAAGATCGACACA 732
|.||||.||||||.|||||.|||||.|||||.||.|..|||||||||||||.|||.||||.|||||||||||||
Sbjct 659 ACCTGTATTATATAGAATCCGATGAATCCCATGGGACAAAATTCAAGCCAAGCCAATATATAAAGATCGACACA 732
Query 733 ATTGCTGCTGATGAGAGTTTTACCCAGATGGATTTGGGTGATCGCATCCTCAAACTCAACACTGAAATTCGTGA 806
|||||||||||||||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||.|||||
Sbjct 733 ATTGCTGCTGATGAGAGTTTTACTCAGATGGATTTGGGTGACCGCATCCTTAAACTCAACACTGAAATCCGTGA 806
Query 807 GGTGGGGCCTATAGAAAGGAAAGGATTTTATCTGGCTTTTCAAGACATTGGGGCGTGCATTGCCCTGGTTTCAG 880
|||||||||||||||||||||||||||||||.|||||||||||||.|||||.||.|||||.||.|||||.||||
Sbjct 807 GGTGGGGCCTATAGAAAGGAAAGGATTTTATTTGGCTTTTCAAGATATTGGAGCATGCATCGCTCTGGTCTCAG 880
Query 881 TCCGTGTTTTCTACAAGAAATGCCCCTTCACTGTTCGTAACTTGGCCATGTTTCCTGATACCATTCCAAGGGTT 954
||||.|||||||||||.||||||||||||||.||.||.||||||||.|||||||||||||||||.|||||||||
Sbjct 881 TCCGAGTTTTCTACAAAAAATGCCCCTTCACCGTGCGGAACTTGGCTATGTTTCCTGATACCATCCCAAGGGTT 954
Query 955 GATTCCTCCTCTTTGGTTGAAGTACGGGGTTCTTGTGTGAAGAGTGCTGAAGAGCGTGACACTCCTAAACTGTA 1028
|||||.|||||||||||||||||.|||||.||.|||||.|||||||||||.|||||.||.|||||||||||.||
Sbjct 955 GATTCTTCCTCTTTGGTTGAAGTGCGGGGCTCATGTGTAAAGAGTGCTGAGGAGCGAGATACTCCTAAACTCTA 1028
Query 1029 TTGTGGAGCTGATGGAGATTGGCTGGTTCCTCTTGGAAGGTGCATCTGCAGTACAGGATATGAAGAAATTGAGG 1102
.||||||||||||||.||||||||.|||||||||||||||||.||||||||||||||.|||||||||||.||||
Sbjct 1029 CTGTGGAGCTGATGGGGATTGGCTTGTTCCTCTTGGAAGGTGTATCTGCAGTACAGGGTATGAAGAAATCGAGG 1102
Query 1103 GTTCTTGCCATGCTTGCAGACCAG-GATTCTATAAAGCTTTTG-CTGGGAAC--ACAAAATGTTCTAAATGTCC 1172
||||||||||||...||| ||| || || ||| || ||||||||.|
Sbjct 1103 GTTCTTGCCATGAAGGCA---CAGTGA--------------TGACTG---ACCAACAAAATGAT---------- 1146
Query 1173 TCCACACAGTTTAACATACATGGAAGCAACTTCTGTCTGTCAGTGTGAAAAGGGTTATTTCCGAGCTGAAAAAG 1246
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1247 ACCCACCTTCTATGGCATGTACCAGGCCACCTTCAGCTCCTAGGAATGTGGTTTTTAACATCAATGAAACAGCC 1320
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1321 CTTATTTTGGAATGGAGCCCACCAAGTGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAA 1394
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1395 ATGTGGCTTAGACACCAGCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACATACAGGCCTGA 1468
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1469 TCAACAATTCCGTGATAGTACTTGACTTTGTGTCTCACGTGAATTACACCTTTGAAATAGAAGCAATGAATGGA 1542
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1543 GTTTCTGAGTTGAGTTTTTCTCCCAAGCCATTCACAGCTATTACAGTGACCACGGATCAAGATGCACCTTCCCT 1616
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1617 GATAGGTGTGGTAAGGAAGGACTGGGCATCCCAAAATAGCATTGCCCTATCATGGCAAGCACCTGCTTTTTCCA 1690
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1691 ATGGAGCCATTCTGGACTACGAGATCAAGTACTATGAGAAAGAACATGAGCAGCTGACCTACTCTTCCACAAGG 1764
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1765 TCCAAAGCCCCCAGTGTCATCATCACAGGTCTTAAGCCAGCCACCAAATATGTATTTCACATCCGAGTGAGAAC 1838
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1839 TGCGACAGGATACAGTGGCTACAGTCAGAAATTTGAATTTGAAACAGGAGATGAAACTTCTGACATGGCAGCAG 1912
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1913 AACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTC 1986
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 1987 TTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTT 2060
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2061 ACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAG 2134
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2135 CAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTT 2208
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2209 GGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGG 2282
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2283 TGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACA 2356
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2357 TCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTC 2430
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2431 CTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGAT 2504
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2505 TCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGC 2578
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2579 ATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCT 2652
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2653 GATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTC 2726
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2727 TGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTGGTGGAAAAATCCCCA 2800
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2801 TAAGGTGGACAGCCCCAGAAGCCATCGCCTACAGAAAATTCTCCTCAGCAAGCGATGCATGGAGCTATGGCATT 2874
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2875 GTCATGTGGGAGGTCATGTCCTATGGAGAGAGACCTTATTGGGAAATGTCTAACCAAGATGTCATTCTGTCCAT 2948
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 2949 TGAAGAAGGGTACAGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCTACACCAGCTGATGCTCCACTGCTGGC 3022
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 3023 AGAAGGAGAGAAATCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGACAAACTGATCCGAAATCCCAGT 3096
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 3097 GCCCTTCACACCCTGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTGTT 3170
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 3171 TGTCACAGTTGGTGACTGGCTAGATTCTATAAAGATGGGGCAATACAAGAATAACTTCGTGGCAGCAGGGTTTA 3244
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 3245 CAACATTTGACCTGATTTCAAGAATGAGCATTGATGACATTAGAAGAATTGGAGTCATACTTATTGGACACCAG 3318
Sbjct 1147 -------------------------------------------------------------------------- 1146
Query 3319 AGACGAATAGTCAGCAGCATACAGACTTTACGTTTACACATGATGCACATACAGGAGAAGGGATTTCATGTA 3390
Sbjct 1147 ------------------------------------------------------------------------ 1146
