Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_033297.3
- Aligned Length:
- 2153
- Identities:
- 152
- Gaps:
- 1982
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTCCACCGCCTCCATCGCCGGTTGTGTTCGCAAGAGGCGACCTCAGTTTCCCAGGTGGCGCTGCGGCAGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCCAAAGTCGGACTTTCAAAACCAACCCGAAGTTTTGAACCCGGCGGCGGCAGTTGTCACTGGCACAGGTTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGTGGTGGCGCCAGTGTACTACTTCTGGGGAGGTCTCAACCAGGTTCTGGCACCTTCAATCCCCACCTGATAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCGTATCATCACGGTATCCCGCTTTTCCCCCAGTTCCCCAAGAGCGTCCTTCCTTTCCCTAGTCACAGGATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGTTTTGGTCTGATAGTGCATCCACCTACCCCAGTGTTGCATCCCCACTTCCCTCTTTCCATCTAACGTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCTTTCCTGGGGATACCTTGGGTATCCCCCGCTAGGAGAGCAAGCACAAGACACCAGGGAGCCAGACCCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGCTCCCCTGCCACAGGATATGAATACGAGCCTCAGCTGGTTTGAGCAGCTGGATGTGCTTCTCAACGCTACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATGGAAATGTGGTCCGGAATAAGCAGTGGCTGTATCCTCTTGGGGTCTCCACAGAGCTCATTGGCCTGTGCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGTTTCTTCTGTAGCAGTGGCTGTATCTTCTTGGGGTCTCCACCGCAGGCCAGCACCAGGAGCTGCTGCTGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAGCTGGCTGAGGGACGACAGGCTCAGGTTGGCAGTTGGAAGGATCTCCATTCATGTTGTCCAATCTAAGCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTCTGCCCACTACCTTCACCATGTCTGTTTCTTCATCCAGCTCTTAATTCAGTCTTCTGGACAGTAACAGTAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGGGAACTTTTATGGAAGCCAGATCCCCAGAGGAGCACCCTTTCTAACCTGGAGCCCAGCATCTTTCAGCTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGCCCAGAGTCTTAAGCAAGAGGACCTATTCCTTTGGGGCCCCAAAATGCTCCTGAATGACCTGTAAGGACTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTTAAGAATAGTAGGATGAAGGCTTCTTTGCCCACCCTCCCCTCCAAGGCCCTGTTTCTGGGCTGCCCGCCCCT 1036
Query 1 ---------------------------------------------------------ATGCAGTGG--CGCCAT 15
||.| |.| |.||||
Sbjct 1037 ACCTTCTTGAAGTAGCTATTATCTGTCTTATCTACTGAGGCTTTTCACTGCCTGCCCATCC--TTGCCCCCCAT 1108
Query 16 CTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTA 89
||||||||||||||||||||..|||||||||||||||.|||.||.||||||.||||||..||||||||||||||
Sbjct 1109 CTCAGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTGTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTA 1182
Query 90 CAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCT 163
||||.|||.| |||||||||||||||||||.|||||.|||||||||||.||||||||||.||
Sbjct 1183 CAGGTGTGCG-------------CTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGTCT 1243
Query 164 GGTCTCGAACTCCTGACCTCAAG--------------------------------------------------- 186
|||||.|||||.|||||||||||
Sbjct 1244 GGTCTTGAACTTCTGACCTCAAGTGATCTGCCCGCCTCGCCCTCCCAAAGTGCTGGGATTACAGTTGTGAGCCA 1317
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1318 CCATGCCCAGCCTATAGCTGTACCTTCTGAGTGCAAGCTCAGTTGAACTTGGAAAGTAATGGGAGTTCCCATTC 1391
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1392 TGGTGAGTAGAATGAGGTAGGACACTGCTCTAGGGCAGTAGTGCTGGGGGATGCAAAGGAGGATGAGATATTCT 1465
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1466 GGTGGGACTTGGATCTGGACAGTAGGAGGCTACCTTTCCTCATCTCCAGCTTCTGCCTTTTTTTTTTTTTTTTT 1539
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1540 TGAGGCAAGGTCTTACTCAGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAGCCTCCGCTTC 1613
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1614 CTGTACTAAAGCAATCCTCCCACCTTAGCCCCCCAAGTAATAATATATGGGACTACAGGCACACGCTATCATGC 1687
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1688 CTGGCTAATTTTTAAATATTTTTTGTAGAGACAGGTTTTCACCATGTTGCCCAGGCTGGTCTCGAACTCCTGGG 1761
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1762 CTCAACTGATCCACCAACTTTGGCCTCCCAAAGTGTTCAGATTACAGGTGTGAGCTGCTACCATGCCTAGCCCC 1835
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1836 AGCTTCTACTGCTTGAGGCTCTCTTTGGCATCTCCACACATCATCCTTAGCAGCCCAGACTGCATTTCTGTAGC 1909
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1910 AGCCTCTTCCCTGGTCTCTTCTTTCAGTCTCTCTGCCTCTAATCCAGTGGCTTTAAGAATTTTTTGGCTGTGAC 1983
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1984 TTCCAGTAAGAAATACAATTTACATTGTGACCTAGTAAATATGTGTGTAGATTTATTAACTGAAATAAAAATGT 2057
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2058 TATGATTTAATTTTTATCCTTAGTGGGAGTGATACACTGATATTTTCTATTATATTTCATTAAAAAATGCCTTG 2131
Query 187 ------- 186
Sbjct 2132 TGACTAA 2138
