Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_033712.1
- Aligned Length:
- 3324
- Identities:
- 164
- Gaps:
- 3138
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCTTCCGTTTCCATCCCGGACCCGACAATGGGCGGGAAAAAGAAGGCTTTACACGACTACGCGGCGGAGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCGACCTGGTGGTGAAGCACCTGATTGAGCACAGTGACTCTGGGGACACGTCTGTGGTGGAGACCCTTTACTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGCCTGCGAGCTGCCCGTGCGCGTGCGGAGGGACCGCATCCTGGAACACCTGTCCTCGGGCAGGCAGCACG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCTGCGGACGCCCATTCTCATGTAAATGTCAGTGCCAACGCTGGTGTTTCAGGAGTCATCCCAGCGGGCTGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTATTTTAGGATTCTCTGCCCTGCAAACGTTTCCAAAGTACGTGGACAGGCCGCCTGATGACACTACGTTTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGGATCTGCTAGTGGCTTGCCTACTTAGGGAGTAAACCCTGTGAAGTCTCGCAGTTTTGTTAAAGTGTGCGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCACCTGAATGCTGCCTTATCACAAGCCAGATACATACTGCCGCCTCGGATCTCGCTGCCACCAGCCTTACTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACACCCGTGCCACCCGCCCTTGCCCCGTCAGCCTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACGGTACCTCCTCCCGCTGTGGGCCACACGTCTCTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGACTTGTCTGCCCGGGAGGATGCAACACCATCTGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAAAGATACCAGCAGTGCCCTCAGAGCAGACCAGCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAGGCCCGAGATGCTCTCGTGACTTTGGAGCCGGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGTGGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGACC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTGAGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACATTGTCCTCAACGACCAGCGGCACTTTGATCCGGTTTTCCAGTTCTTGCACAAGCAAGTTTGTGTCAGCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGCCCTGGGGAGGATCCACTGGATCACCGCCGTCACTGCCTGTTCCCGGCGGCCTCTCCGGCTTCCCTAAAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGCAGGTGGGACTTTCTACAACGCTGCTGTGCACGACGTGGATGCCGTATGCATGTTGCTGGGGGAAGCCACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCGGACACTGTGTTTTCTCTGGGACATGTCTTCTGCCCAGATATGGCCGCCTTAAAAGATGCAGATGCTGTTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATCAGCATGAAGTTTCCCTGTGAGGCCGTGGTTAGCGTGGACATCAGCCAGCACTGCACAGACAGCTGCGACC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGACGTCAGCCAGCACTGCACAGACAGCTGCGACCAGAGACTGGAGATGGAGTCTTGCCCTGTCACCCAGGCT 1480
Query 1 ---ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCT 71
.||||.|||.||.|||||.||||||||||||||||.||||||||||||||||||||||..||||||.||||
Sbjct 1481 GGAGTGCAATGGTGCGATCTCGGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCT 1554
Query 72 CCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTT 145
.|||||||||||||||||||.|||||||||||.||.|||..|||||||||||||||||||.|||||.|||.|||
Sbjct 1555 TCTGAGTAGCTGGGATTACACGCGTGTGCCACCACGCTCGGCTAATTTTTGTATTTTTAGTAGAGATGGGATTT 1628
Query 146 CACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------- 186
||||.||||||||||||||||||||||||.||||||||..|
Sbjct 1629 CACCATGTTGGCCAGGCTGGTCTCGAACTACTGACCTCGTGATCCACCTGCCATGGCCTCCCAAAGTGCTGGGA 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 TTACAGGCGTGAGCCACCATGCTCGGCCTAAAAAACAATTTTCTTGAAGAATCCGATTTTGTGCATAGTAATGA 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 CACAGCACCATTCCTGAGAAATAGGAAATATATGTGTGTGGTATGAAAAGCCCATATTCTGTTCTTGTCACCTG 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 AATCTAGGCTTCCTCTTTGGATGTGAACGCGGGAATGAACAGTGGCTGTTTTCCACCCAAAGGGGCGTGGAGAC 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CTTTTGGAAACGGGCTTTCTCCTTTCCATTTTGCAGCCGGGGGCGGGTGGAAACCTTCCTTCGAAGGGTAGTGC 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 CTTGGGGAGCAGCAGACCTGCTCTGAGTCCAGCTTAGCTTTCCAAAATTCTGTGTGGAACTTACTGGAGATGTT 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 TTTATATATTTGAAAATAATGGCCTGTATTTCTCACGCTATACTTAAAAAAAATAACTAACCTTTTAAACAAAG 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 ATATTCAAACTCACCCTTGTGCTGAAAGCACTCACATTTCTGTGTTCATTCCTGAAAGGGCGTTTTAGAGTCCC 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 CGTTTCTACGTTCTATGTGGCACCCTCTTGCCGAGGGAACATCCAGAATCCCTCCACTTCCTGTCTAGTTTGAG 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 GCCTCAACACCTTCATGATCCAGAGTCCTGCGGCTATGAGGGGGTGGGCCCACCACCGCCCAGCCCTCCTTGGT 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 GGACGTGGGGACAGGTAGGAGCCTAGGGAAAGGGGTGGGCGGGCTCTGGTGTGACGGCGTGAGCGCTAGCCAGG 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 AAGATGGGGCCAGGGCTTGGCATGGCACCTCACCTGTGGGGGAACTCGGCGGAGCTTCCTGGCGGCATCTCCCC 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 CTCTTGCCTTGGTCCTTTCTATCTTTGTTTTAGGCCAATTTCTAAAAAGACTGAGGCCTCCTTCAAGGTTGAAC 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 AGATTTCTAGAGCCTTGTTTTTGCTGTGACAAGTCCCTAGTCCCTGTTCACAACTCTGAAACCAAGAAACCTGA 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 GAACCAAGAGAACTGAAATGAAGCCCGTTGGTCTCAGCCTGGCTTGAGCCAACATGAGGCTCTCTGCTGCCTTT 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 TGTTTTCTTAGGTTTTGCTGAGAAACGGGAGTGCGTTCTGTGTCGGTGTTTGTGACGCCCTGAGACCCTGCTTG 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 GCCTAGCTAAAGTCCAGAAGGCCTGGGCCCCACAGGGCTTGGATGAGGGCTCATGGGCCTGTACTTCAGGAGGC 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 CTGAGAGGCCCGGTCAGTCCCATGAGGCTACTCGGCTTGGCCCGCAGGTCCTCCGAGGCACAGGGCAGAGGGAC 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 ACCCCAGGGACCCATCAGACTCACGACACAGAGAAACTCAAGTGGGGTGCCAGGGCCGGCCACAGAGGCCACGG 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 GCTTCCTGCCTGTGAGGAGCCGCCCTGTTTGTCTGAGCCCTTTGGAGATTTAGGTTGAGTCATGAGAACCGGTC 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 ATTGGAACATACACTTTATTATGTTACAAAAACAAAAATCCCCACTGAAACACAGCTAAAAAAATAACACATTT 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 TCCCAAGATTACATTACCAAAAACAGTTGTTATGTCATTGGAGGGCGTCCATTAATACTGCTCGGAGAAGCACG 3256
Query 187 -------------------------------------------------------------------- 186
Sbjct 3257 ATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTGCTTTAACTGGTAA 3324
