Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15487
Subject:
NR_036595.1
Aligned Length:
2674
Identities:
159
Gaps:
2491

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGACAAAAAGTCTGCCCTGTAACGGTACTTCTTGCTCAGTGACAGCAGCAACCCACCTCCTTATCCCTTTCATT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCTTATAAACCCGTCCTTTAAACCACTATTTGGGAGGTCGGGCCATCAGTTTCGGCGTTTTTTCCAGAGAGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGCTCACAGCGATATCGCGAGAGACGGGAATTGCTCTGTCACGCAAGCTGGAGTGCAGTGGTGCCATCTCGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCACTGTGACCTCTGCCTCCTGGGCTCAAGCCATCCTCCCACCTCAGCCCTTCAAGTAGCTGGGATTACAGGTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCATCCTCTCACTCGCCTCTGACTTTTCGCACAGGAGAGAGCTGGTCGAATAGTACAATTCCCCGATGTGAAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGGGAGAAGCTGGGGAAAGGAAGAATGATCTTCAGGCAGTAAGGGCCCCTACTCCAGTATGATTGGTGTCCTTA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TAAAAAGGAGAAATTGGACACAGACACCCTACCAAGAAGAACACTATGTGAAGATGAAGGCAGAGATCAGGGTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATGCCTCTACTTGCTGAGAAACTCCTACAGTTGCCAGCCCACCACTAGAAGCAAAGGAAGAAGCACAGCCCTCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAAGGAACCAACCCTGCTAATGCCTTGGTCTTGGACTTGCAGCCTCCAGAACAGCGAGCCAATACATTCCTGTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTTTAAGCCACTGACTGTGGCACTTTATTACAGCAGCACTAGGAAACTCATACAGGAGGTGACAGTGCTCAGAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAAACAGGACCTTCCACTTCCATGGCAAAGCCCTCATCTTTCGTGCCCATGCGCCATTTGATCTGCACACAAAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CACTGAGCAGGTTCCTCAGCTATTATTATCCCCACCTTTCAGATGGAAAGAACTGAAGCTCAAGAGGGCCAAAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAATTTGGCTATGGCTTTCTTTATTTTCTTTTTCATGGGCAGAAGTAGATTTCAGTTTTGGTCCCTTTCCACTA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCATATCAGGTTGCCTTAAGGCAACTTTGAAAAGTCTAAAATATTAAACAGTTTGTGAAGTTATTATCATTATT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CATAAAGGACAGCGCGAGGTTAGTCTTACCCTAGAGAGCCCCATTGTTGGCCCAAAGCATCTTGCCAGGAGCCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TATAGGACCATGTTTTCAAGGCCCCCAAAGAGCACAGGGCTATTGGTCCATCCCAGCTCCTGGAATGGCTCATT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTACCCACCCTGCCTCCAGCTGAGGAGCCAGGGAGAAGCACTGACCCCTGATCTTGCTATCCCTTCCATTACAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCTTGCCAGAGGAGCTTTTTTCAGGGGTGGCCGCTTCCCTCTCCTCAAGAGAATTCTGGGGACCAACCAGCTCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGCCTGCTGTTGGCCTCAGGGTCACATCTCACCCAGACACCCCCACCATTCCCTCAGGTCTAGGGATGCTGCTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CCCTACCATGGGATCTTCTTTTTATTTTTATTTATTTATATTTTCCTTATGCCTAGTGTAAAGGGATTTCTTTT  1480

Query    1  --------------------------------------------------------------ATGCAGTGGCGC  12
                                                                          .|||||||||||
Sbjct 1481  CTTTTTTGTTTTTGTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGCAGTGGCGC  1554

Query   13  CATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGA  86
            .|||||.|||||||||||||||||.||||..||||||||.|||||||.||||||.|||||| .||.||||||||
Sbjct 1555  TATCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCC-CAGGAGCTGGGA  1627

Query   87  TTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAG  160
            ||||||  |||||||||.|||.|...|||||||||.||.||||||.|||||.|||||||||||.||||||||||
Sbjct 1628  TTACAG--GTGTGCCACCACATTTGGCTAATTTTTTTACTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAG  1699

Query  161  GCTGGTCTCGAACTCCTGACCTCAAG------------------------------------------------  186
            |||.|||||||.||||||||||||.|                                                
Sbjct 1700  GCTAGTCTCGATCTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAGAATGCTGGGATTACAGGCATGAG  1773

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1774  CCACCGCTCCCAGCCAGGATCTTCTTTTTAAAGCTATCACCACCCACTCTCATTCCCCAGGACTCTCCTCACCC  1847

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1848  CTCCGGCTGCAAAGGCAGCTGGTGTCCCTACTGGCTCCTTCCTTTCTGCCCCTAAAGACAGGCACACAGGTGAT  1921

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1922  TTTCCTTTTAAGTGTTTTTCTGTGGATTACTGCGGGGAAATTGACAGGGGCTACAGGGGCTGATAAAAGGAATA  1995

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1996  ATCTTTGATATTCTTTCAGTTGGGTCGCTGATTTTCTTGCTGGGCTGACAAGAGCAATCTTCCCTACTTGGAAT  2069

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2070  CTTGGTTTTATTCCTTAGCATGGGCCTTATCAAACCTACTTTTTAATGAAGGGAGAATGAAGAAGCCATTGAAG  2143

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2144  CAGACCTCTAGCTGCCAGTCAGGTCTGCTCTGAAGGCTGCCTATCTGCGGGGACATGTGACTTCTGGGGCTTTC  2217

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2218  CAGATTAAGTAATGCTCACCCCACATGTCTGAAATTCTCCAAACACTATTCCGGCCCTGCTGTGATTCTTAGAG  2291

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2292  CAGAGGTTCTTTGCCTTTTTAGTGTAATGGATCCCTCAGCAACTTGGTGAGCCCTTCTCAGAATAAAGTTTCTA  2365

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2366  ATGCAGAAAGTAAAACACATGGGATAATAAGGGAAGTCATGTCCTTTGAAATCCTTATCAAAAATATTTTTCAA  2439

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2440  ATTTTGTGATATAATAAGTTTGGTTGCTATTATATAGCATAATATAACTTCATATCTAATAGCTATTGTTATTT  2513

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2514  TGAAGTAGTGGTGAATATATATGCTATTTTGAGATGTCTAAAACAACTGTAATGTGTTACAAAAATATCCATGA  2587

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2588  TTTCTATCGGTGACAAAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  2661

Query  187  ----------  186
                      
Sbjct 2662  AAAAAAAAAA  2671

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