Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_136212.1
- Aligned Length:
- 3430
- Identities:
- 164
- Gaps:
- 3244
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTGCATGGCCCGCTGATTGCTCCTCACAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCACACACATGCAAGCCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACACATGCACAGTTGCACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAG 1628
Query 1 ------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAG 44
.|||||||||.|.|||||.||||||||||||||||..||||||.
Sbjct 1629 ACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAA 1702
Query 45 GTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATT 118
||||||||.||||||.||||.|.|||||||||.||||||||||||||||||||||||||.|..|.||.||||||
Sbjct 1703 GTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAATT 1776
Query 119 TTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGA------------- 179
|||||.|||||||.|||||||||||||||||.||||||.|||||||||||.||||||||||
Sbjct 1777 TTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCAC 1850
Query 180 ---CCTC---------AAG------------------------------------------------------- 186
|||| |||
Sbjct 1851 CTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAA 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTG 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 TGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGG 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 CAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCT 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 GAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAGGG 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 TGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTCCT 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 CACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGAGA 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 GACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCAAT 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 GGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGGAG 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 GGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCAT 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 CCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGCAC 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 CCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCAGC 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 CTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGAC 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 CACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCTGC 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 ACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCCGG 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 CTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAGTG 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 CCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCCGG 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 CCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCAGC 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 CTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGATAT 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 ATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAAGG 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 TAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGCTG 3404
Query 187 -------------------------- 186
Sbjct 3405 GATACAGTGGCTCATGCCTATAATCC 3430
