Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_136513.2
- Aligned Length:
- 2561
- Identities:
- 160
- Gaps:
- 2375
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAACCCCAAGCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTAATAGTGACTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTTTCCTCAAACTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAGGTTTGCCAGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTTCCTGAGACCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATATAGATGGTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAATTTTGTTGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGAGTCATTACTCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAAAGGCTTTTGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAGGAATGTGGGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAATGTAATAACTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTTCACCCAGAAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTTCAGCATTGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAACTTGGGAAAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAGACAGAGATCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTTGTATGGGGAAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAAAGGAAATGTTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGTTGCATCTCTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGCCTGCTCTAGTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTTGTAAATATATA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACATATATCATGTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACTACCTTTATATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTATTTTCTTTATT 1776
Query 1 ---------------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCC 35
.||||.||||.|.|||||.||||||||||||||||
Sbjct 1777 TTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCC 1850
Query 36 ATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACT 109
..||||||||||||||.|||||||.||.|||.|.||||.||||||||||||||||||||...||||||.|..|.
Sbjct 1851 GCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTTGCCACCATTCC 1924
Query 110 CAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTC 183
||.|||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.
Sbjct 1925 CAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTT 1998
Query 184 AAG----------------------------------------------------------------------- 186
..|
Sbjct 1999 GTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGCCCGGCTGTTTTTTTAA 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 GATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCTTATAGATAACACATAA 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 TAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTAGGAAAGAATCTTTAGA 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 AGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCTTATATATTTTATAGTA 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 GGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTCTAGGTGTCCCTCTGCT 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 GTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATGGACTGTGTTCTGTAAA 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 AAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATAAAATGATTTCTTAATA 2516
Query 187 --------------------------------------------- 186
Sbjct 2517 TTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA 2561
