Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_146861.2
- Aligned Length:
- 2817
- Identities:
- 161
- Gaps:
- 2632
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTTCAGCTTTCACCGGCTGGGAGTCCGGAGCTGCAGCAGAGGCCACACCCAGGGCTTGGTGGTCCCGCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGGAGCTCAGCAGGCGCTTGCTGCTTGAACCGGTCAAAGAAGGAACGAATGAATGACCCTTTTGCCAGGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAGACCCGGGGGCCTCAGGGAGCTGCGAATCCCATGGACTCCTCCCGCAGCCTGGGGGACCTCGGGCCTTTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCGGGAGGTAGGGCGCGGGGCTCCGCTAGCTCCGGGCGCCCGGAATCCCGCGACGGCAGGGGCGAGCCGAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGGCGGCGGCCACGAGGACAGAACGGCAGATCGGGCCCTCGGACCTCGGGCCGGGGAGGAATTGGACCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCCTGGGTCAGAGAGAAAGTGCTCTTTCTCCTGCACCCAGAGAGGTGGTTAGGGACTCGAGGGGACCCTGCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGAAGAGGTGGCCGGTGCAGAGGACCTTCCTCATGCGGGTGGAGAGGACCACGGCGAGGAGCCCAACTACCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTGTCTTTCAACGACAAAAGCGAATTTCTGGCAGGCGTGTAGCCCCGCCGCGGGACGCAGCAGACCCACCCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATACGTGCTTGTGCGGGTGGAGGATTATCAGGTAACACAAGAAGTGTTGCAGACCTCCTGGGCCAAGGGTCGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGACCACGAGGACTGAGGAGCACTTCGTGACCGCGCTCACTTTTCGCAGCAGTAGAGAGGGACAGCCTGGGGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTGGGGCCCTGCTGAATCCCGGGCTCTCCAGGCACGAACAGGGGCATCCCGCGTCCACGCCGCGGGGAGGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGTTTCACCGTCTCCAGGGACTTGGCTCGAGGAAATTAAACTCTAATGAGTAGCTCGAGAAATGTTCCGGGATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGGATGAGCGATCATCCTTAAAAGAAAATGCTATTCTGGGAGCTCCAACCTGCAATTAACCTACAGAAGGAAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTTTGAGAGGCTGGTGCAGCGCTTCGGGGAGGCAGATTAAGAACTGTAAGCAGCATAATACCTCCTTTGTGGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGAATTCCTTCGCTGTCTGGGGACCTAAGTCATTCAGAAGAGGTGGAGAAAAGATATTTTCAGATTGGCAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTGGGAGTTTTGAAATGAGAAAACCTGTTGTTAATTTGCATTTTGGAATAACTCTCAATTGATCTCTTTTCTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCCCCGCCCCCCTCTTGTTTCTCTTTAGGACCTAGAAACAGAAGTGAAGTTTGAAGTCTGCTCTCTGCAAAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGTGGGAGTGGGTGGAGAAGAGGCTTGTTTTAAAAGCCAAAAACAGAAAGTAAAAAGAAATGGGAAAGTAAAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCAAAGCAGCAAGTGACTCTCTTCTGATGTGCACTTTTCATTTTTCTCCCCCACATTTCAGTGTTAGAAAGAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGAGAGGAGCTAGGGAAAGAAGGAGTTGGGGACAGAAGACTAAGATTTCAACGTGAAATTCCATTTACAAAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTTTACTGCAAACAATAGCTAATTTAGTCCTGTAAACATGCATTTATCATACATTTTAATTTTAATATTAAAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TACTGCATGTAAATGTTCTGAACTAAAGGTAGATAGCAATATGTAGTTTGCCATAAAATGAATGCATGTCTTAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTTTTCCATAGTTCTTCATTAATGAGACTTGTAGTCAAGAATAGATTGAAGATACCATTCTCCTTGTGTAGTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAAAAAAATCTCCTCTGGTAATACTGAAACAACTAATTTTTCTTATTTTGTTTGTTCCTCTTTATTATTAAATA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTATGTGAATTAACTCTTTAGTAGTTGGCCTGGTTGAAGCTCTGTGAGGAGCAAAGCAGCCCTCTCCAGGTGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGCTTGACTTTACCACCTGAAGGAGTATTTACTGCAAGAATTAACAAAGCAGACTGCAGTGCAACGGCACGAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTGGCTCACCACAACCTCTACCTCCAGGGTTCAAGCGATGCTCCTACCTCAGCCTCCTCAGTAGCTGGGATTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGGCATGTGCCATCACCCCGGCTAATTCTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGCCAGGCTGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCTTGAACTCCCAACCTCAGGTGATCCTCCTGCCTCCGCCTCCCAAAGTGCTGGGATTACAGGTGTTCCTGATC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAAGCAGAACCCTGTTATTTGAAGAGCCTGAGAAATCTTATCCCGTTTACAAATGTCCTGGGAGTGCATCCAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTGAAACTTGGGCATCCTCAATACTAAGAAATCTCTGAGAATGACTGGATCTTGGCTCTTTGATCTTACCTCTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTCCTCTGAAAAACATGATTATCTAAAATTGTGTTAGGTGGATGAACCGCATCAAAGACTTCCAGAAGCCACTC 2368
Query 1 -----------------------------------------------------------------ATGCAGTGG 9
.||||.|||
Sbjct 2369 CAGTGACCATAAGATAAATGTCAGAATCGCATAACCCCCAGGATCAGCCTGTTGCTCAGGCTGGAGTGCAATGG 2442
Query 10 CGCCATCTCAGCTCACTGCAACCTCCAT--CTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGC 81
|.|.||||.||||||||||||||.|| | |||||.|||||||||.||||||.||||||.||||||||||||||
Sbjct 2443 CACGATCTGAGCTCACTGCAACCACC-TGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCTGAGTAGC 2515
Query 82 TGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTG 155
||||||||||||||..|||.||.||||.||.||||||||||||.||||||.|||||.|||||||..||.|||||
Sbjct 2516 TGGGATTACAGGCGCCTGCAACCACACCCAGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTTGCCATGTTG 2589
Query 156 GCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------------- 186
||||||||||||||||||||.||||||||.|
Sbjct 2590 GCCAGGCTGGTCTCGAACTCTTGACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGC 2663
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2664 TTGAGCCACCGAGCCTGGCCTCTACTTTTTATTACTGTCATGTAGTTAGTGATAAAATGCTTCTATCTGAAAAA 2737
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2738 AAATTTGTTGTTCTAAATTCTAAAAAATTCTCGTGATTATTGCTTAAATTTTAATAAAGCAGATGTGATTTTCA 2811
Query 187 ----- 186
Sbjct 2812 AATTA 2816
