Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15747
- Subject:
- NM_001161576.2
- Aligned Length:
- 1998
- Identities:
- 927
- Gaps:
- 1071
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTGGTTTAAGGGCTGGAACGAGTGCGAGCAGACTGTTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGCTGTCGCTGCTCAAGCGCGTGAGCCAGACCCAGGCCCGCTTCCTCCAGCTCTGCCTGGAGCACTCGCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGACTGCGCCGAGCTGCACGTCCTCGAACGCGAGGCCAACAGCCCCGGAATCATTAACCAATGGCAACAGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCAAGGATAAAGTGATTTCCCTCCTGTTAACTCATCTGCCTTTGCTGAAGCCAGGAAACCTCGACGCGAAAGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAATATATGAAACTGCTGCCCAAAATCCTGGCTCACTCTATTGAACACAACCAGCACATTGAGGAGAGCAGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCTGCTGTCCTATGCTTTGATACATCCAGCCACTTCGTTAGAAGACCGTAGTGCTTTAGCCATGTGGCTGAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACTTGGAGGACCGCACGTCGACCAGCTTTGGTGGCCAGAACCGAGGCCGCTCAGACTCTGTGGATTATGGACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACACACTACTATCACCAAAGACAGAACTCTGATGACAAGCTCAATGGGTGGCAGAACTCTCGGGATTCTGGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCATCAATGCCTCCAACTGGCAGGACAAAAGCATGGGGTGTGAGAATGGCCATGTGCCCCTCTACTCCTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCATCTGTCCCCACCACAATCAATACGATTGGAACCAGCACAAGTACAAATGTTCCAGCCTGGCTGAAAAGCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCGCCTGCACAAATATGCCGCGCTTTTCTCCCAGATGACCTATGAGGAGATGATGGCCCTCACCGAGTGCCAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGAGGCGCAGAATGTTACCAAAGGTGCAAGACACAAAATTGTCATCAGTATTCAGAAGCTCAAAGAAAGACAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCTCCTGAAGTCTTTGGAAAGGGACATCATCGAGGGGGGCAGCCTGCGCATCCCGCTCCAGGAACTGCACCA 962
Query 1 -ATGATCCTGACTCCGATCAAGGCCTACAGCTCCCCGAGCACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGG 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GATGATCCTGACTCCGATCAAGGCCTACAGCTCCCCGAGCACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGG 1036
Query 74 CCCCGCGTCAGCCCTCACTGATGGGCCCCGAGAGCCAGAGCCCCGACTGCAAAGATGGGGCCGCAGCCACTGGC 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCCCGCGTCAGCCCTCACTGATGGGCCCCGAGAGCCAGAGCCCCGACTGCAAAGATGGGGCCGCAGCCACTGGC 1110
Query 148 GCCACGGCCACCCCCTCGGCCGGGGCCAGCGGGGGGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGAGCT 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCCACGGCCACCCCCTCGGCCGGGGCCAGCGGGGGGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGAGCT 1184
Query 222 GGCCGTCGCCCCCCTGCCAGAGGGGGACCTCCCCGGGCAGTTCACACGCGTCATGGGGAAAGTGTGCACACAGC 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGCCGTCGCCCCCCTGCCAGAGGGGGACCTCCCCGGGCAGTTCACACGCGTCATGGGGAAAGTGTGCACACAGC 1258
Query 296 TCTTGGTCTCCAGACCTGATGAGGAAAATATAAGTTCCTATTTACAGCTCATAGACAAGTGTCTAATTCATGAG 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCTTGGTCTCCAGACCTGATGAGGAAAATATAAGTTCCTATTTACAGCTCATAGACAAGTGTCTAATTCATGAG 1332
Query 370 GCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCC 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCC 1406
Query 444 TCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCTCC 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCTCC 1480
Query 518 CGACGGCTGGCTCTGTGGGCGGTGGCATGGGCAGACGGAACCCGCGCCAGTACCAGATCCCCTCTCGGAACGTC 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGACGGCTGGCTCTGTGGGCGGTGGCATGGGCAGACGGAACCCGCGCCAGTACCAGATCCCCTCTCGGAACGTC 1554
Query 592 CCTTCCGCCCGCCTGGGCCTCTTGGGCACCAGTGGATTCGTCAGCTCCAACCAGCGCAACACCACAGCTACCCC 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCTTCCGCCCGCCTGGGCCTCTTGGGCACCAGTGGATTCGTCAGCTCCAACCAGCGCAACACCACAGCTACCCC 1628
Query 666 CACCATCATGAAACAAGGAAGACAGAACCTGTGGTTTGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCGCA 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CACCATCATGAAACAAGGAAGACAGAACCTGTGGTTTGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCGCA 1702
Query 740 CCCACAGCTCAGTCCAGAGGACCCGCTCGCTGCCCGTGCACACTTCCCCACAGAACATGCTGATGTTCCAGCAG 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CCCACAGCTCAGTCCAGAGGACCCGCTCGCTGCCCGTGCACACTTCCCCACAGAACATGCTGATGTTCCAGCAG 1776
Query 814 CCAGGTTCCCAAGTTCACAGTGGACTGTGTTTAACAGACCTTAGAGGTTGGTTGAGCCTGAGTGGAGCCCCTTC 887
||
Sbjct 1777 CC------------------------------------------------------------------------ 1778
Query 888 CATGCCAGCGCTGACAGTCCCCAAGTCCTCCCAGGGAGAATTCCAGCTTCCCGTGACCGAACCTGACATCAACA 961
||||||||||||||||||||||||||||||||||||||
Sbjct 1779 ------------------------------------AGAATTCCAGCTTCCCGTGACCGAACCTGACATCAACA 1816
Query 962 ACAGGCTGGAGTCGTTGTGCCTCAGTATGACCGAACACGCCCTGGGAGACGGGGTTGACCGGACCTCCACCATC 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1817 ACAGGCTGGAGTCGTTGTGCCTCAGTATGACCGAACACGCCCTGGGAGACGGGGTTGACCGGACCTCCACCATC 1890
