Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15997
Subject:
XM_005247793.3
Aligned Length:
1851
Identities:
388
Gaps:
1455

Alignment

Query    1  ------------------------------------ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC  38
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGGAAGCGGAATTTAAGGACCATAGTACAGCTATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC  74

Query   39  AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG  112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG  148

Query  113  TCTACAGTGGTTCAGACCGACATGCTGT------------ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT  174
            ||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||
Sbjct  149  TCTACAGTGGTTCAGACCGACATGCTGTACAGGTAATTCAACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT  222

Query  175  CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA  296

Query  249  TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC  322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC  370

Query  323  CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGT-AAGTTC---------CCTAAATTTTTT  386
            ||||||||||||||||||||||||||||||||||||||||||||.| ||..||         ||||.|      
Sbjct  371  CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTATCAACCTCTCCACTTCTCCTACA------  438

Query  387  TTTCCTG--GATTTAAAA----TTT-------------------------------------------------  405
               ||||  .|.||||.|    .||                                                 
Sbjct  439  ---CCTGCACAGTTAATAAGCCGTTCCCAGGCTTCCAGTTCTACCAGCGGCAGTATTACCCAACAGACTATGTT  509

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  510  ACTAGGGAGTACTTCCCCTACCCTAACGGCAAGCCAAGCTCAAATGTATCTCCGAGCTCAAATGCTGATTTTCA  583

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  584  CACCCGCTACCACTGTGGCTGCTGTACAGTCTGACATTCCTGTTGTCTCGTCGTCATCGTCATCTTCCTGTCAG  657

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  658  TCTGCAGCTACTCAGGTTCAGAATTTAACATTACGCAGCCAGAAGTTGGGTGTATTATCTAGCTCACAGAATGG  731

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  732  TCCACCAAAAAGCACTAGTCAAACTCAGTCATTGACAATTTGTCATAACAAAACAACAGTGACCAGTTCTAAAA  805

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  806  TCAGCCAACGAGATCCTTCTCCAGAAAGTAATAAGAAAGGAGAGAGCCCAAGCCTGGAATCACGAAGCACAGCT  879

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  880  GTCACCCGGACATCAAGTATTCACCAGTTAATAGCACCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAAT  953

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  954  AAAACATCAGCAGATTCCTCTTCATTCACCACCTTCCAAAGTTTCCCATCATCAGCTGATATTACAACAGCAGC  1027

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1028  AACAGCAAATTCAGCCAATCACACTTCAGAATTCAACTCAAGACCCACCCCCATCCCAGCACTGTATACCACTC  1101

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1102  CAGAACCATGGCCTTCCTCCAGCTCCCAGTAATGCCCAGTCACAGCATTGTTCACCGATTCAGAGTCATCCCTC  1175

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1176  TCCTTTAACAGTGTCTCCTAATCAGTCACAGTCAGCACAGCAGTCTGTAGTGGTGTCTCCTCCACCACCTCATT  1249

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1250  CACCAAGTCAGTCTCCTACTATAATTATTCATCCACAAGCACTTATTCAGCCACACCCTCTTGTGTCATCAGCT  1323

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1324  CTCCAGCCAGGGCCAAATTTGCAGCAGTCCACTGCTAATCAGGTGCAAGCTACAGCACAGTTGAATCTTCCATC  1397

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1398  CCATCTTCCACTTCCAGCTTCCCCTGTTGTACACATTGGCCCAGTTCAGCAGTCTGCCTTGGTATCCCCAGGCC  1471

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1472  AGCAGATTGTCTCTCCATCACACCAGCAATATTCATCCCTGCAGTCCTCTCCAATCCCAATTGCAAGTCCTCCA  1545

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1546  CAGATGTCGACATCTCCTCCAGCTCAGATTCCACCACTGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCC  1619

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1620  TGAAATTCTGTCCCAGGGCCAGGTTTTGGTGCAGAATGCTTTGGTGTCAGAAGAGGAACTTCCAGCTGCAGAAG  1693

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1694  CTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTCCACAGACTGTTGCGGTAAACCTACAAGTGCAACCACCA  1767

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1768  GCACCTGTTGATCCACCAGTGGGAATGCATTTGAACCAGTGTCATCTGCACAAAGTTTTTTCTCTTAAGTTTAT  1841

Query  406  -  405
             
Sbjct 1842  T  1842

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