Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15997
- Subject:
- XR_241509.4
- Aligned Length:
- 3261
- Identities:
- 388
- Gaps:
- 2865
Alignment
Query 1 ------------------------------------------------------------------ATGGATAC 8
||||||||
Sbjct 1 GCAGCCCATGTTAGTGATGGAGGAGAGAAGATGGCGGAAGCGGAATTTAAGGACCATAGTACAGCTATGGATAC 74
Query 9 TGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCT 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCT 148
Query 83 CCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGT------------ACAG 144
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 149 CCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGTACAGGTAATTCAACAG 222
Query 145 GCATTGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGAT 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCATTGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGAT 296
Query 219 GCTGCATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAA 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCTGCATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAA 370
Query 293 GTTTGTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCT 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTTTGTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCT 444
Query 367 GT-AAGTTC---------CCTAAATTTTTTTTTCCTG--GATTTAAAA----TTT------------------- 405
.| ||..|| ||||.| |||| .|.||||.| .||
Sbjct 445 ATCAACCTCTCCACTTCTCCTACA---------CCTGCACAGTTAATAAGCCGTTCCCAGGCTTCCAGTTCTAC 509
Query 406 -------------------------------------------------------------------------- 405
Sbjct 510 CAGCGGCAGTATTACCCAACAGACTATGTTACTAGGGAGTACTTCCCCTACCCTAACGGCAAGCCAAGCTCAAA 583
Query 406 -------------------------------------------------------------------------- 405
Sbjct 584 TGTATCTCCGAGCTCAAATGCTGATTTTCACACCCGCTACCACTGTGGCTGCTGTACAGTCTGACATTCCTGTT 657
Query 406 -------------------------------------------------------------------------- 405
Sbjct 658 GTCTCGTCGTCATCGTCATCTTCCTGTCAGTCTGCAGCTACTCAGGTTCAGAATTTAACATTACGCAGCCAGAA 731
Query 406 -------------------------------------------------------------------------- 405
Sbjct 732 GTTGGGTGTATTATCTAGCTCACAGAATGGTCCACCAAAAAGCACTAGTCAAACTCAGTCATTGACAATTTGTC 805
Query 406 -------------------------------------------------------------------------- 405
Sbjct 806 ATAACAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGATCCTTCTCCAGAAAGTAATAAGAAAGGAGAG 879
Query 406 -------------------------------------------------------------------------- 405
Sbjct 880 AGCCCAAGCCTGGAATCACGAAGCACAGCTGTCACCCGGACATCAAGTATTCACCAGTTAATAGCACCAGCTTC 953
Query 406 -------------------------------------------------------------------------- 405
Sbjct 954 ATATTCTCCAATTCAGCCTCATTCTCTAATAAAACATCAGCAGATTCCTCTTCATTCACCACCTTCCAAAGTTT 1027
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1028 CCCATCATCAGCTGATATTACAACAGCAGCAACAGCAAATTCAGCCAATCACACTTCAGAATTCAACTCAAGAC 1101
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1102 CCACCCCCATCCCAGCACTGTATACCACTCCAGAACCATGGCCTTCCTCCAGCTCCCAGTAATGCCCAGTCACA 1175
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1176 GCATTGTTCACCGATTCAGAGTCATCCCTCTCCTTTAACAGTGTCTCCTAATCAGTCACAGTCAGCACAGCAGT 1249
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1250 CTGTAGTGGTGTCTCCTCCACCACCTCATTCACCAAGTCAGTCTCCTACTATAATTATTCATCCACAAGCACTT 1323
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1324 ATTCAGCCACACCCTCTTGTGTCATCAGCTCTCCAGCCAGGGCCAAATTTGCAGCAGTCCACTGCTAATCAGGT 1397
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1398 GCAAGCTACAGCACAGTTGAATCTTCCATCCCATCTTCCACTTCCAGCTTCCCCTGTTGTACACATTGGCCCAG 1471
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1472 TTCAGCAGTCTGCCTTGGTATCCCCAGGCCAGCAGATTGTCTCTCCATCACACCAGCAATATTCATCCCTGCAG 1545
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1546 TCCTCTCCAATCCCAATTGCAAGTCCTCCACAGATGTCGACATCTCCTCCAGCTCAGATTCCACCACTGCCCTT 1619
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1620 GCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTGTCCCAGGGCCAGGTTTTGGTGCAGAATGCTTTGG 1693
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1694 TGTCAGAAGAGGAACTTCCAGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTCCACAGACT 1767
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1768 GTTGCGGTAAACCTACAAGTGCAACCACCAGCACCTGTTGATCCACCAGTGGGAATGCATTTGAACCAGTGTCA 1841
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1842 TCTGCACAAAGTTTTTTCTCTTAAGGTTTATCAGGTAGAAGATGTGTGTGAAGAAGAAATGCCAGAAGAGTCAG 1915
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1916 ATGAATGTGTCCGGATGGATAGAACCCCACCACCACCCACTTTGTCTCCAGCAGCTATAACAGTGGGGAGAGGA 1989
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1990 GAAGATTTGACTTCTGAACATCCTTTGTTAGAGCAAGTGGAATTACCTGCTGTGGCATCAGTCAGTGCTTCAGT 2063
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2064 AATTAAATCTCCATCAGATCCCTCACATGTTTCTGTTCCACCACCTCCATTGTTACTTCCAGCTGCCACCACAA 2137
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2138 GGAGTAACAGTACATCTATGCACAGTAGCATTCCCAGTATAGAGAACAAACCTCCACAGGCTATTGTTAAACCA 2211
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2212 CAGATCCTAACCCATGTTATTGAAGGCTTTGTGATTCAGGAGGGATTGGAGCCATTTCCTGTGAGTCGTTCCTC 2285
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2286 TTTGCTAATAGAACAGCCTGTGAAAAAACGGCCTCTTTTGGATAATCAGGTGATAAATTCAGTGTGTGTTCAGC 2359
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2360 CAGAGCTACAGAATAATACAAAACATGCGGATAATTCATCTGACACAGAGATGGAAGACATGATTGCTGAAGAG 2433
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2434 ACATTAGAAGAAATGGACAGTGAGTTGCTCAAGTGTGAATTCTGTGGGAAAATGGGATATGCTAATGAATTTTT 2507
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2508 GCGGTCAAAACGATTCTGCACTATGTCATGTGCCAAAAGGTACAATGTTAGCTGTTCTAAAAAATTTGCACTTA 2581
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2582 GTCGTTGGAATCGTAAGCCTGATAATCAAAGTCTTGGGCATCGTGGCCGTCGTCCAAGTGGCCCTGATGGGGCA 2655
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2656 GCGAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATCCATCTGCAGAAGAAGACTTGGCTTCTCATGAAGA 2729
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2730 TTCTGTGCCATCTGCTATGACAACTCGTCTGCGCAGGCAGAGCGAGCGGGAAAGAGAACGTGAGCTTCGGGATG 2803
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2804 TGAGAATTCGGAAAATGCCTGAGAACAGTGACTTGCTACCAGTTGCACAAACAGAGCCATCTATATGGACAGTT 2877
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2878 GATGATGTCTGGGCCTTCATCCATTCTTTGCCTGCACTACTGGGTATTTTCTCATACCCCCCAAGTCGATAAAA 2951
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2952 ACTGACTAGTCCTGCTTCTGCTGTGACACCTCAGCCGGTGAAGATATTAAAGGTGCTTTCTTCTCTTCAGTCTG 3025
Query 406 -------------------------------------------------------------------------- 405
Sbjct 3026 ATTTCTCTCGAGAGGCTGCCAGGATATCGCAGATGAATTCAGAGCACAGGAGATTGATGGACAGGCCCTTCTCT 3099
Query 406 -------------------------------------------------------------------------- 405
Sbjct 3100 TGCTGAAAGAAGACCATCTCATGAGTGCAATGAATATCAAGCTAGGCCCAGCCCTGAAGATCTGTGCACGCATC 3173
Query 406 -------------------------------------------------------------------------- 405
Sbjct 3174 AACTCTCTGAAGGAATCTTAACAGGAACATGAAGCCTTGATAAAACAGCAGTTTTACTTTTCTCACAAAAACTT 3247
Query 406 ----- 405
Sbjct 3248 GTAAG 3252
