Construct: shRNA TRCN0000031213

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_054070.1-490s1c1
DNA Barcode:
GAAACACTTCGTGCAGTATTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Afg3l1 (114896)
Gene Description:
AFG3-like AAA ATPase 1
Transcript:
RefSeq NM_054070.1 (NON-CURRENT)
Match location:
Position 490 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000031213)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAAACACTTCGTGCAGTATTA
Hairpin Sequence:
5'-CCGG-GAAACACTTCGTGCAGTATTA-CTCGAG-TAATACTGCACGAAGTGTTTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAAACACTTCGTGCAGTATTACTCGAGTAATACTGCACGAAGTGTTTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAAACACTTCGTGCAGTATTACTCGAGTAATACTGCACGAAGTGTTTC-3'

Other clones with same target sequence:

  1. TRCN0000326059