Construct: shRNA TRCN0000049920
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_001983.2-946s1c1
- DNA Barcode:
- CAAGAGAAGATCTGGCCTTAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- ERCC1 (2067)
- Gene Description:
- ERCC excision repair 1, endonuclease non-catalytic subunit
- Transcript:
- RefSeq NM_001983.2 (NON-CURRENT)
- Match location:
- Position 946 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000049920)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CAAGAGAAGATCTGGCCTTAT
- Hairpin Sequence:
-
5'-CCGG-CAAGAGAAGATCTGGCCTTAT-CTCGAG-ATAAGGCCAGATCTTCTCTTG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCAAGAGAAGATCTGGCCTTATCTCGAGATAAGGCCAGATCTTCTCTTGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACAAGAGAAGATCTGGCCTTATCTCGAGATAAGGCCAGATCTTCTCTTG-3'
Other clones with same target sequence:
-
TRCN0000343920
