Construct: shRNA TRCN0000097814

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016867.1-578s1c1
DNA Barcode:
GAGCTCTTTACTTTGCAGTTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Gipc2 (54120)
Gene Description:
GIPC PDZ domain containing family, member 2
Transcript:
RefSeq NM_016867.1 (CURRENT)
Match location:
Position 578 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000097814)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAGCTCTTTACTTTGCAGTTA
Hairpin Sequence:
5'-CCGG-GAGCTCTTTACTTTGCAGTTA-CTCGAG-TAACTGCAAAGTAAAGAGCTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAGCTCTTTACTTTGCAGTTACTCGAGTAACTGCAAAGTAAAGAGCTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAGCTCTTTACTTTGCAGTTACTCGAGTAACTGCAAAGTAAAGAGCTC-3'

Other clones with same target sequence:

  1. TRCN0000332479