Construct: shRNA TRCN0000098767
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_172124.2-1479s1c1
- DNA Barcode:
- CCAATCCGAAAGCTGTATTTA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- B3gat2 (280645)
- Gene Description:
- beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
- Transcript:
- RefSeq NM_172124.2 (CURRENT)
- Match location:
- Position 1479 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000098767)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAATCCGAAAGCTGTATTTA
- Hairpin Sequence:
-
5'-CCGG-CCAATCCGAAAGCTGTATTTA-CTCGAG-TAAATACAGCTTTCGGATTGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAATCCGAAAGCTGTATTTACTCGAGTAAATACAGCTTTCGGATTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAATCCGAAAGCTGTATTTACTCGAGTAAATACAGCTTTCGGATTGG-3'
Other clones with same target sequence:
(none)
