Construct: shRNA TRCN0000102509
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_144829.1-147s1c1
- DNA Barcode:
- GAAAGAAGTGTTGAGCGGATT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Aarsd1 (69684)
- Gene Description:
- alanyl-tRNA synthetase domain containing 1
- Transcript:
- RefSeq NM_144829.1 (CURRENT)
- Match location:
- Position 147 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000102509)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GAAAGAAGTGTTGAGCGGATT
- Hairpin Sequence:
-
5'-CCGG-GAAAGAAGTGTTGAGCGGATT-CTCGAG-AATCCGCTCAACACTTCTTTC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGAAAGAAGTGTTGAGCGGATTCTCGAGAATCCGCTCAACACTTCTTTCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGAAAGAAGTGTTGAGCGGATTCTCGAGAATCCGCTCAACACTTCTTTC-3'
Other clones with same target sequence:
-
TRCN0000327541
