Construct: shRNA TRCN0000106025
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_178119.2-3713s1c1
- DNA Barcode:
- GCTGTTTAATAGAACGTGATT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Agap1 (347722)
- Gene Description:
- ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
- Transcript:
- RefSeq NM_178119.2 (NON-CURRENT)
- Match location:
- Position 3713 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000106025)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCTGTTTAATAGAACGTGATT
- Hairpin Sequence:
-
5'-CCGG-GCTGTTTAATAGAACGTGATT-CTCGAG-AATCACGTTCTATTAAACAGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCTGTTTAATAGAACGTGATTCTCGAGAATCACGTTCTATTAAACAGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCTGTTTAATAGAACGTGATTCTCGAGAATCACGTTCTATTAAACAGC-3'
Other clones with same target sequence:
-
TRCN0000158851
-
TRCN0000281187
-
TRCN0000316909
