Construct: shRNA TRCN0000113631

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_173004.1-1278s1c1
DNA Barcode:
GCCAGAAGACATAAGTCGAAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cntn4 (269784)
Gene Description:
contactin 4
Transcript:
RefSeq NM_173004.1 (NON-CURRENT)
Match location:
Position 1278 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000113631)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCAGAAGACATAAGTCGAAT
Hairpin Sequence:
5'-CCGG-GCCAGAAGACATAAGTCGAAT-CTCGAG-ATTCGACTTATGTCTTCTGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCAGAAGACATAAGTCGAATCTCGAGATTCGACTTATGTCTTCTGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCAGAAGACATAAGTCGAATCTCGAGATTCGACTTATGTCTTCTGGC-3'

Other clones with same target sequence:

(none)