Construct: shRNA TRCN0000179521

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001018087.1-468s1c1
DNA Barcode:
GTTGATGAGATGAAGCAGTAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ldoc1 (434784)
Gene Description:
leucine zipper, down-regulated in cancer 1
Transcript:
RefSeq NM_001018087.1 (CURRENT)
Match location:
Position 468 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000179521)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTTGATGAGATGAAGCAGTAT
Hairpin Sequence:
5'-CCGG-GTTGATGAGATGAAGCAGTAT-CTCGAG-ATACTGCTTCATCTCATCAAC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTTGATGAGATGAAGCAGTATCTCGAGATACTGCTTCATCTCATCAACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTTGATGAGATGAAGCAGTATCTCGAGATACTGCTTCATCTCATCAAC-3'

Other clones with same target sequence:

(none)